RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 LZTR1Q8N653 840 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 RTL3Q8N8U3 475 aaKnown RBP15.8■□□□□ 0.12
SEC13-201ENST00000337354 TRIM58Q8NG06 486 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 UCMAQ8WVF2 138 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 TSC1Q92574 1164 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 CLDN23Q96B33 292 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 ZNF670Q9BS34 389 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 GOLPH3Q9H4A6 298 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 LMAN1LQ9HAT1 526 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 PRDM16Q9HAZ2 1276 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 NEU3Q9UQ49 428 aa15.8■□□□□ 0.12
SEC13-201ENST00000337354 ZNF318Q5VUA4 2279 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 K7EQS6 105 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 NPC1O15118 1278 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 ZRANB2O95218 330 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEC13-201ENST00000337354 EGFP01133 1207 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 ATP5BP06576 529 aaKnown RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 RHOCP08134 193 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 ERCC2P18074 760 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 IL4RP24394 825 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CTNNA2P26232 953 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CD70P32970 193 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CTNNA1P35221 906 aaKnown RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 GJC1P36383 396 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 RPS9P46781 194 aaKnown RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 YBEYP58557 167 aaPredicted RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 MRPS21P82921 87 aaKnown RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 KDSRQ06136 332 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 SULT2A1Q06520 285 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 FZD5Q13467 585 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 GEN1Q17RS7 908 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 HSF5Q4G112 596 aaPredicted RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 ASTLQ6HA08 431 aaPredicted RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 TFAP2DQ7Z6R9 452 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 REXO1L1PQ8IX06 675 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 KATNAL2Q8IYT4 538 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 WFDC5Q8TCV5 224 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 TTC17Q96AE7 1141 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CSPG4P5Q96PW8 444 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 FEM1AQ9BSK4 669 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 IER2Q9BTL4 223 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CALN1Q9BXU9 219 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 FOXQ1Q9C009 403 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 MAGEH1Q9H213 219 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 ELOVL2Q9NXB9 296 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 RAPGEFL1Q9UHV5 662 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 MTF2Q9Y483 593 aaPredicted RBP15.79■□□□□ 0.12
SEC13-201ENST00000337354 CAPN6Q9Y6Q1 641 aa15.79■□□□□ 0.12
SEC13-201ENST00000337354 CXorf51AA0A1B0GTR3 108 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 TNNT1P13805 278 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 POLR2EP19388 210 aaKnown RBP15.78■□□□□ 0.12
SEC13-201ENST00000337354 AOC1P19801 751 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 MESP2Q0VG99 397 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 DPYSQ14117 519 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 DPYSL3Q14195 570 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 PLEKHG6Q3KR16 790 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 HS1BP3Q53T59 392 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 ADIPOR2Q86V24 386 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 UMODL1-AS1Q8N2C9 162 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 UBL4BQ8N7F7 174 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 EXD1Q8NHP7 514 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 RAPGEF5Q92565 580 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 EZH1Q92800 747 aaPredicted RBP15.78■□□□□ 0.12
SEC13-201ENST00000337354 ACDQ96AP0 544 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 RBM41Q96IZ5 413 aaKnown RBP15.78■□□□□ 0.12
SEC13-201ENST00000337354 OR51B4Q9Y5P0 310 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.78■□□□□ 0.121e-11■□□□□ 8.3
SEC13-201ENST00000337354 ZDBF2Q9HCK1 2354 aa15.78■□□□□ 0.12
SEC13-201ENST00000337354 LRRD1A4D1F6 860 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 RAMP2O60895 175 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 ATG13O75143 517 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 ASLP04424 464 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 CSKP41240 450 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 KIR2DL1P43626 348 aaPredicted RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 PEX5P50542 639 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 NDST2P52849 883 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 RWDD2BP57060 319 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 GNA12Q03113 381 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 ANKRD20A8PQ5CZ79 823 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 PITRM1Q5JRX3 1037 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 RNF219Q5W0B1 726 aaPredicted RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 MBLAC2Q68D91 279 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 CWF19L1Q69YN2 538 aaKnown RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 TRMT11Q7Z4G4 463 aaKnown RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 CCDC105Q8IYK2 499 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 FAF2Q96CS3 445 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 ALG14Q96F25 216 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 C2orf49Q9BVC5 232 aaPredicted RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 MAK16Q9BXY0 300 aaKnown RBP15.77■□□□□ 0.12
SEC13-201ENST00000337354 CIPCQ9C0C6 399 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 MUC3BQ9H195 1237 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 KCND1Q9NSA2 647 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 DNAI1Q9UI46 699 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 PLA2G4CQ9UP65 541 aa15.77■□□□□ 0.12
SEC13-201ENST00000337354 C3orf70A6NLC5 250 aaPredicted RBP15.76■□□□□ 0.11
SEC13-201ENST00000337354 CHURC1-FNTBB4DL54 471 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 KRT1P04264 644 aa15.76■□□□□ 0.11
SEC13-201ENST00000337354 CD48P09326 243 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms