RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 ANGEL2Q5VTE6 544 aaKnown RBP13.5□□□□□ -0.25
COL2A1-201ENST00000337299 TRMT10BQ6PF06 316 aaKnown RBP13.5□□□□□ -0.25
COL2A1-201ENST00000337299 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 GATAD2AQ86YP4 633 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 CENPSQ8N2Z9 138 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 PHTF2Q8N3S3 785 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 DNAJB14Q8TBM8 379 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 PSPC1Q8WXF1 523 aaKnown RBP13.5□□□□□ -0.25
COL2A1-201ENST00000337299 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 ENTPD7Q9NQZ7 604 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
COL2A1-201ENST00000337299 TRDMT1O14717 391 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 HS6ST1O60243 411 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SULT1E1P49888 294 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 TMEM198Q66K66 360 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 DNAJC14Q6Y2X3 702 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 AKAP14Q86UN6 197 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ZDHHC14Q8IZN3 488 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 RDM1Q8NG50 284 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 RP9Q8TA86 221 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 TCF12Q99081 682 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 PKP2Q99959 881 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 FRMD8P1Q9BZ68 369 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 LRRC40Q9H9A6 602 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 HEMK1Q9Y5R4 338 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 TSPAN9O75954 239 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SORBS2O94875 1100 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 TCF4P15884 667 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF12P17014 697 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 EMC2Q15006 297 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 MSS51Q4VC12 460 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 DCAF6Q58WW2 860 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 BROXQ5VW32 411 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 AHI1Q8N157 1196 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 NACA2Q9H009 215 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 NRP2O60462 931 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 MOCS2O96007 188 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 APOA4P06727 396 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 CYP2F1P24903 491 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ADSLP30566 484 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 GABRB2P47870 512 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 IDH3AP50213 366 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 CLCN2P51788 898 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 GPX6P59796 221 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 TPI1P60174 286 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 RUNX1T1Q06455 604 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ARL13BQ3SXY8 428 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 UNC5AQ6ZN44 842 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 BBS12Q6ZW61 710 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF781Q8N8C0 355 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 C12orf43Q96C57 262 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 VCPIP1Q96JH7 1222 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 CNPY3Q9BT09 278 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
COL2A1-201ENST00000337299 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
COL2A1-201ENST00000337299 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 KCNU1A8MYU2 1149 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MAGEB2O15479 319 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 CD48P09326 243 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 BMT2Q1RMZ1 405 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 PTCD3Q96EY7 689 aaKnown RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MAGED4Q96JG8 741 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 NSMCE2Q96MF7 247 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 BDH2Q9BUT1 245 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 SLC17A6Q9P2U8 582 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 SLCO1B7G3V0H7 640 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 H3BNX3 289 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MEIS2O14770 477 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 CLIC3O95833 236 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ITGAXP20702 1163 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF846Q147U1 533 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 SGO1Q5FBB7 561 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ASPSCR1Q9BZE9 553 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 HACD3Q9P035 362 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 SQORQ9Y6N5 450 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 PDLIM1O00151 329 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 BIRC5O15392 142 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 TYROBPO43914 113 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 TNFRSF21O75509 655 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MYCP01106 439 aaPredicted RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 PRKCBP05771 671 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms