RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TRIP10Q15642 601 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 PEG10Q86TG7 708 aaKnown RBP12.49□□□□□ -0.41
FN1-202ENST00000336916 MKL1Q969V6 931 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 PNKPQ96T60 521 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 POLD4Q9HCU8 107 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SNX8Q9Y5X2 465 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 NDST1P52848 882 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 RGS1Q08116 209 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 TBL1YQ9BQ87 522 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 PEAK1Q9H792 1746 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SERPINB3P29508 390 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 TAB1Q15750 504 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 MST1RQ04912 1400 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 NUP214P35658 2090 aaPredicted RBP12.49□□□□□ -0.41
FN1-202ENST00000336916 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
FN1-202ENST00000336916 LTFP02788 710 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 SPIDRQ14159 915 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
FN1-202ENST00000336916 KYQ8NBH2 561 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 HJURPQ8NCD3 748 aaPredicted RBP12.49□□□□□ -0.41
FN1-202ENST00000336916 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 OPTCQ9UBM4 332 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 PRKAG3Q9UGI9 489 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 GIT1Q9Y2X7 761 aa12.49□□□□□ -0.41
FN1-202ENST00000336916 CHADO15335 359 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 GLI1P08151 1106 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 ARID3BQ8IVW6 561 aaPredicted RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 SNTG2Q9NY99 539 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 RPS6KA6Q9UK32 745 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 GHRP10912 638 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 SCUBE1Q8IWY4 988 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 GJD3Q8N144 294 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 FIBCD1Q8N539 461 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 CD101Q93033 1021 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 Q96MT0 163 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 TTLL2Q9BWV7 592 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 IARS2Q9NSE4 1012 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 JCHAINP01591 159 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 FASP25445 335 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 TGFBR2P37173 567 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 RARRES1P49788 294 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 DNAJC3Q13217 504 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 ZNF614Q8N883 585 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 OR6A2O95222 327 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 KCNA3P22001 575 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 RTP1P59025 263 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 KNL1Q8NG31 2342 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 ITGB4P16144 1822 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 PIK3R1P27986 724 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 HSD17B3P37058 310 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 GRB10Q13322 594 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 DDX39BQ13838 428 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 DNAJC9Q8WXX5 260 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 PCDHGB3Q9Y5G1 929 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 CXCL8P10145 99 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 NFYCQ13952 458 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 GSPT2Q8IYD1 628 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 NKAPQ8N5F7 415 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 KLHL4Q9C0H6 718 aa12.48□□□□□ -0.41
FN1-202ENST00000336916 EXOSC4Q9NPD3 245 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 POLR2AP24928 1970 aaKnown RBP12.48□□□□□ -0.41
FN1-202ENST00000336916 ITGADQ13349 1161 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 NDUFAF6Q330K2 333 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 KLHL3Q9UH77 587 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 TRIM24O15164 1050 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 KRT75O95678 551 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 CPA3P15088 417 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ATG16L2Q8NAA4 619 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 BHMTQ93088 406 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 DPY30Q9C005 99 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 TCF7L2Q9NQB0 619 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 MRPS33Q9Y291 106 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 ANKDD1BA6NHY2 528 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 RECQL4O94761 1208 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 SLC12A3P55017 1021 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SAMD4BQ5PRF9 694 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 STRADAQ7RTN6 431 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms