RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 WNK3Q9BYP7 1800 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 TMEM233B4DJY2 109 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 CLOCKO15516 846 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
SEC23B-202ENST00000336714 RBL1P28749 1068 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 SREBF1P36956 1147 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 SEPHS1P49903 392 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 CDH6P55285 790 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 MOGQ16653 247 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 ARL13BQ3SXY8 428 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 RWDD4Q6NW29 188 aaKnown RBP11.31□□□□□ -0.6
SEC23B-202ENST00000336714 CHSY3Q70JA7 882 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 IL12RB2Q99665 862 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
SEC23B-202ENST00000336714 TP63Q9H3D4 680 aaPredicted RBP11.31□□□□□ -0.6
SEC23B-202ENST00000336714 POPDC2Q9HBU9 364 aa11.31□□□□□ -0.6
SEC23B-202ENST00000336714 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 RGSL1A5PLK6 1076 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 E7ENX8 843 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 LTFP02788 710 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 ALDOAP04075 364 aaKnown RBP11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CPA3P15088 417 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 HPCAL1P37235 193 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 FAM214AQ32MH5 1076 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CCNYL1Q8N7R7 359 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
SEC23B-202ENST00000336714 FETUBQ9UGM5 382 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 DYNC1LI2O43237 492 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-202ENST00000336714 XYLBO75191 536 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
SEC23B-202ENST00000336714 AP3B2Q13367 1082 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 PRPSAP1Q14558 356 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 ARCQ7LC44 396 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 PIGZQ86VD9 579 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 PLD6Q8N2A8 252 aaKnown RBP11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CANT1Q8WVQ1 401 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 ZNF606Q8WXB4 792 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 HGH1Q9BTY7 390 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 CCDC167Q9P0B6 97 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
SEC23B-202ENST00000336714 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 GSRP00390 522 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 PTPN9P43378 593 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 GABRB2P47870 512 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 HSD17B4P51659 736 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 RHBDL3P58872 404 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 ITPK1Q13572 414 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CLPPQ16740 277 aaPredicted RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 KIAA0319LQ8IZA0 1049 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SGF29Q96ES7 293 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 TUFT1Q9NNX1 390 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CNGB3Q9NQW8 809 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 TBC1D14Q9P2M4 693 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 GNPTGQ9UJJ9 305 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CNOT6Q9ULM6 557 aaKnown RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 RABL2BQ9UNT1 228 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 TBX3O15119 743 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 MFN2O95140 757 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 IL1BP01584 269 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 ERVK-10P10266 1014 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 MYCLP1P12525 358 aaPredicted RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 KDELR1P24390 212 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 COPZ1P61923 177 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 TXNL4AP83876 142 aaKnown RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SELENBP1Q13228 472 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SPATA6LQ8N4H0 392 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 PLAC1Q9HBJ0 212 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 APOBEC3GQ9HC16 384 aaKnown RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 XPNPEP3Q9NQH7 507 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
SEC23B-202ENST00000336714 COPG2Q9UBF2 871 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 ERVK-11Q9UQG0 969 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
SEC23B-202ENST00000336714 CCRL2O00421 344 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms