RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RAD54BQ9Y620 910 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 C9IYK1 514 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 ZNF189O75820 626 aaPredicted RBP18.11■□□□□ 0.49
LRCH3-201ENST00000334859 NFKB1P19838 968 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 MX2P20592 715 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 SERPINB8P50452 374 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 GJA9P57773 515 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 IRF5Q13568 498 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 TBCCQ15814 346 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 MUM1Q2TAK8 710 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 AZIN2Q96A70 460 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 SMARCD1Q96GM5 515 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 AGAP2Q99490 1192 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 RBBP8Q99708 897 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 SIKE1Q9BRV8 207 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 FAM167BQ9BTA0 163 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 CCDC106Q9BWC9 280 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 TKTL2Q9H0I9 626 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 WDCPQ9H6R7 721 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 ZNF358Q9NW07 568 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 COPG2Q9UBF2 871 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 OR12D3Q9UGF7 316 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 LUC7L3O95232 432 aaKnown RBP18.11■□□□□ 0.49
LRCH3-201ENST00000334859 FAM163BP0C2L3 166 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 SCNN1GP51170 649 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 HSP90AA5PQ58FG0 334 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 CERCAMQ5T4B2 595 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 ITPRIPL1Q6GPH6 555 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 RNF34Q969K3 372 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 UBP1Q9NZI7 540 aa18.11■□□□□ 0.49
LRCH3-201ENST00000334859 MTSS1O43312 755 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PRKCGP05129 697 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ATP5BP06576 529 aaKnown RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 GRK2P25098 689 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 CD68P34810 354 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 SERPINB6P35237 376 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 SPRP35270 261 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 HCAR3P49019 387 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 THOC5Q13769 683 aaKnown RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 TSNAXIP1Q2TAA8 658 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 RAB41Q5JT25 222 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 TNS4Q8IZW8 715 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 DTX3LQ8TDB6 740 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 HDAC11Q96DB2 347 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 MFSD3Q96ES6 412 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 CELF6Q96J87 481 aaKnown RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PAAF1Q9BRP4 392 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 MLPHQ9BV36 600 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 BATF3Q9NR55 127 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 CDH9Q9ULB4 789 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 APOBEC2Q9Y235 224 aaKnown RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PTCH2Q9Y6C5 1203 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 NUP205Q92621 2012 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ARL5CA6NH57 179 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ARHGAP42A6NI28 874 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 MEI4A8MW99 385 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 USP1O94782 785 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PSMG1O95456 288 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 RALBP11234 206 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 LIMK2P53671 638 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 GALNT2Q10471 571 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ITGA9Q13797 1035 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 INSCQ1MX18 579 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ANKRD20A4Q4UJ75 823 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PAN2Q504Q3 1202 aaKnown RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 MYLPFQ96A32 169 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PGAP3Q96FM1 320 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-201ENST00000334859 CASS4Q9NQ75 786 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 PNPOQ9NVS9 261 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ADAM28Q9UKQ2 775 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 TRHDEQ9UKU6 1024 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 LRRC42Q9Y546 428 aa18.1■□□□□ 0.49
LRCH3-201ENST00000334859 ZCWPW2A0A1B0GU75 182 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 MYADML2A6NDP7 307 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 ERI2A8K979 691 aaKnown RBP18.09■□□□□ 0.49
LRCH3-201ENST00000334859 LRIG2O94898 1065 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 F9P00740 461 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 CPA3P15088 417 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 PCSK1P29120 753 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 HOXC8P31273 242 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 DNAL1Q4LDG9 190 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 FSTL4Q6MZW2 842 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 TMEM135Q86UB9 458 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 CLPTM1LQ96KA5 538 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 THTPAQ9BU02 230 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 BRD8Q9H0E9 1235 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 CAB39LQ9H9S4 337 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 C20orf96Q9NUD7 363 aaPredicted RBP18.09■□□□□ 0.49
LRCH3-201ENST00000334859 TRPV2Q9Y5S1 764 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 EIF4E1BA6NMX2 242 aaKnown RBP18.09■□□□□ 0.49
LRCH3-201ENST00000334859 HHLA1C9JL84 531 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 NVLO15381 856 aaKnown RBP18.09■□□□□ 0.49
LRCH3-201ENST00000334859 MAGEC1O60732 1142 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 CIB2O75838 187 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 JCHAINP01591 159 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 TPH1P17752 444 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 KCTD11Q693B1 232 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms