RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FGRP09769 529 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 NAA30Q147X3 362 aaPredicted RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LRRC20Q8TCA0 184 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 LPAR1Q92633 364 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 TOP1MTQ969P6 601 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 ZC3H10Q96K80 434 aaKnown RBP5.62□□□□□ -1.51
PTPRB-202ENST00000334414 CAB39LQ9H9S4 337 aa5.62□□□□□ -1.51
PTPRB-202ENST00000334414 USP17L5A8MUK1 530 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 KPNA6O60684 536 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 NOL4O94818 638 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PGK1P00558 417 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PRKAR2AP13861 404 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CD151P48509 253 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GCNT1Q02742 428 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DLG1Q12959 904 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GRAPQ13588 217 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FUT11Q495W5 492 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FBXO43Q4G163 708 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SLC9A4Q6AI14 798 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF438Q7Z4V0 828 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LRRC71Q8N4P6 559 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ATP6V0D2Q8N8Y2 350 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GRAPLQ8TC17 118 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PAK6Q9NQU5 681 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CRLS1Q9UJA2 301 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PDE2AO00408 941 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PLOD2O00469 737 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SNX3O60493 162 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 NMT2O60551 498 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LBPP18428 481 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ADORA1P30542 326 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 COBLL1Q53SF7 1204 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ANKRD26P1Q6NSI1 321 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 BNIPLQ7Z465 357 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 EDC3Q96F86 508 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ACAT2Q9BWD1 397 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF224Q9NZL3 707 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 H3BN98 237 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 EML1O00423 815 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 NADKO95544 446 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PRKCBP05771 671 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 RPA1P27694 616 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 BCAT1P54687 386 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 OSTNP61366 133 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PKN1Q16512 942 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SBK1Q52WX2 424 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FRMD7Q6ZUT3 714 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 RBM12BQ8IXT5 1001 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LZTR1Q8N653 840 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ZBTB8BQ8NAP8 495 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM172AQ8WUF8 416 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 AGAP3Q96P47 875 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CRYL1Q9Y2S2 319 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PLA2G6O60733 806 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM228BP0C875 321 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ATF4P18848 351 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PRKG1Q13976 671 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DDI2Q5TDH0 399 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TOR1AIP2Q8NFQ8 470 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 KIAA1683Q9H0B3 1180 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GNG14A0A1W2PPG7 69 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 YWHAQP27348 245 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GTF2E2P29084 291 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GABRB2P47870 512 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 HERVK_113P62684 666 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CAMK2GQ13555 558 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 MEA1Q16626 185 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 PAGE2BQ5JRK9 111 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DPY19L2Q6NUT2 758 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 USP17L2Q6R6M4 530 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 SPOCD1Q6ZMY3 1216 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 P2RY8Q86VZ1 359 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 MKL1Q969V6 931 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 COA7Q96BR5 231 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FETUBQ9UGM5 382 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 GMPPBQ9Y5P6 360 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 KDM6BO15054 1643 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ERN1O75460 977 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM153BP0C7A2 387 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 LIN52Q52LA3 116 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TWF2Q6IBS0 349 aaKnown RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TMPRSS11AQ6ZMR5 421 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FBXO39Q8N4B4 442 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 IPCEF1Q8WWN9 437 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CD101Q93033 1021 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 C7orf26Q96N11 449 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CDRT15Q96T59 188 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 FAM124BQ9H5Z6 455 aaPredicted RBP5.61□□□□□ -1.51
PTPRB-202ENST00000334414 COQ6Q9Y2Z9 468 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 TRIM17Q9Y577 477 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 DNAJB5O75953 348 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 EGFRP00533 1210 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 CHRM3P20309 590 aa5.61□□□□□ -1.51
PTPRB-202ENST00000334414 ABATP80404 500 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms