RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PIWIL1Q96J94 861 aaKnown RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 TWNKQ96RR1 684 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 SLC4A5Q9BY07 1137 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 TRPV6Q9H1D0 765 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 WDR41Q9HAD4 459 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PCDH18Q9HCL0 1135 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 C20orf96Q9NUD7 363 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 RIMS3Q9UJD0 308 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 BARX2Q9UMQ3 279 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 CEPT1Q9Y6K0 416 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PIGRP01833 764 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PRDX6P30041 224 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 TCF7P36402 384 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 HARS2P49590 506 aaKnown RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 EMP3P54852 163 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 TMEM130Q8N3G9 435 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 DIS3LQ8TF46 1054 aaKnown RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 MRPL4Q9BYD3 311 aaKnown RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 CEP41Q9BYV8 373 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 SEPT10Q9P0V9 454 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PCDHB12Q9Y5F1 795 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 ADGRA2Q96PE1 1338 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PGK2P07205 417 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 STT3AP46977 705 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 CAPSQ13938 189 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 CEACAM7Q14002 265 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 ABHD15Q6UXT9 468 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 NCCRP1Q6ZVX7 275 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 MCRS1Q96EZ8 462 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 ILKAPQ9H0C8 392 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 OGTO15294 1046 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 SUPT20HL2P0C7V6 817 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 IL4RP24394 825 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 CYP2F1P24903 491 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 SDC4P31431 198 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 GTF2A2P52657 109 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 PRAMEP78395 509 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 SUPT20HL1Q3ZLR7 823 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 HACE1Q8IYU2 909 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 NETO2Q8NC67 525 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 NSUN6Q8TEA1 469 aaKnown RBP14.02□□□□□ -0.16
SYNE3-201ENST00000334258 KBTBD7Q8WVZ9 684 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 PPWD1Q96BP3 646 aaKnown RBP14.02□□□□□ -0.16
SYNE3-201ENST00000334258 TMEM79Q9BSE2 394 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 SNRNP25Q9BV90 132 aaKnown RBP14.02□□□□□ -0.16
SYNE3-201ENST00000334258 XYLT2Q9H1B5 865 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 VPS33BQ9H267 617 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 HTTP42858 3142 aa14.02□□□□□ -0.16
SYNE3-201ENST00000334258 C2CD4BA6NLJ0 364 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 ENDOD1O94919 500 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 CLCN2P51788 898 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 SLC10A2Q12908 348 aaPredicted RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM198Q66K66 360 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 ITPRIPL1Q6GPH6 555 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 NAPRTQ6XQN6 538 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 TRIM50Q86XT4 487 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 ERI1Q8IV48 349 aaKnown RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 IRGQQ8WZA9 623 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 RTP4Q96DX8 246 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF512Q96ME7 567 aaPredicted RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 SNX15Q9NRS6 342 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 MAP3K20Q9NYL2 800 aaKnown RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 SH3GLB1Q9Y371 365 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 KPNA7A9QM74 516 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 CHRNGP07510 517 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 P4HA1P13674 534 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 MPSTP25325 297 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 SULT2A1Q06520 285 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 MAP7D1Q3KQU3 841 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 METTL21CQ5VZV1 264 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 TRNP1Q6NT89 227 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 FAM183BPQ6ZVS7 135 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 PLD6Q8N2A8 252 aaKnown RBP14.02□□□□□ -0.17
SYNE3-201ENST00000334258 FNDC8Q8TC99 324 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 GRIN3AQ8TCU5 1115 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 LPAR1Q92633 364 aa14.02□□□□□ -0.17
SYNE3-201ENST00000334258 BOLA2-SMG1P6H3BVE0 249 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 TRIM13O60858 407 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 RNASEH2AO75792 299 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 PTPN1P18031 435 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 ARL2P36404 184 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 APOFQ13790 326 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF423Q2M1K9 1284 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 MAP1SQ66K74 1059 aaPredicted RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 POTEHQ6S545 545 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 MYO1HQ8N1T3 1032 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 PPP1R13LQ8WUF5 828 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 ATP6V1E2Q96A05 226 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM176AQ96HP8 235 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 CENPOQ9BU64 300 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 EFCAB1Q9HAE3 211 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 SNX13Q9Y5W8 968 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 MYO18AQ92614 2054 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 RGS20O76081 388 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms