RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MRPL42Q9Y6G3 142 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 RBM47A0AV96 593 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CLGNO14967 610 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 SNAI1O95863 264 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CHRNGP07510 517 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 RAG1P15918 1043 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 TPH1P17752 444 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 SERPINB5P36952 375 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 FDFT1P37268 417 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 GRM5P41594 1212 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 EML3Q32P44 896 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 PPM1LQ5SGD2 360 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 C4orf22Q6V702 233 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 PDSS2Q86YH6 399 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 C16orf70Q9BSU1 422 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 UBP1Q9NZI7 540 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 A0A1B0GVG6 124 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 ATP9BO43861 1147 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 KLHL2O95198 593 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 STAU1O95793 577 aaKnown RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 TBL3Q12788 808 aaKnown RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 TRIP10Q15642 601 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 GRIK4Q16099 956 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 CERCAMQ5T4B2 595 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 FSTL4Q6MZW2 842 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 PGM2L1Q6PCE3 622 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 PIGZQ86VD9 579 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 C2orf69Q8N8R5 385 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 I6L893 689 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 TXNDC9O14530 226 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 CCNT2O60583 730 aaKnown RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 FKBP6O75344 327 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 HSPA4LO95757 839 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SMPD1P17405 629 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 GP5P40197 560 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 BCAT1P54687 386 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SNX27Q96L92 541 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 OSMRQ99650 979 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 KLHL8Q9P2G9 620 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-201ENST00000333371 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
VPS33B-201ENST00000333371 M0QYT0 321 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 RECQL4O94761 1208 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 POLBP06746 335 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 MMP3P08254 477 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 MLNP12872 115 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 COX4I1P13073 169 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 GRIA2P42262 883 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 MATKP42679 507 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 DGKDQ16760 1214 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 GSTA3Q16772 222 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 KYAT1Q16773 422 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 DUSP28Q4G0W2 176 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 CYS1Q717R9 158 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 RNF148Q8N7C7 305 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 MARK4Q96L34 752 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-201ENST00000333371 NR1H4Q96RI1 486 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-201ENST00000333371 TINF2Q9BSI4 451 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ABHD16BQ9H3Z7 469 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 PIGVQ9NUD9 493 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 SF3B1O75533 1304 aaKnown RBP eCLIP12.59□□□□□ -0.398e-6■■■■■ 107
VPS33B-201ENST00000333371 A0A096LPK6 155 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 G3V2L1 256 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 AIM2O14862 343 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 MPSTP25325 297 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 GLRBP48167 497 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
VPS33B-201ENST00000333371 FKBP1BP68106 108 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 SOX4Q06945 474 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-201ENST00000333371 GRB14Q14449 540 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ZBTB6Q15916 424 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ARHGAP17Q68EM7 881 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 ZDHHC17Q8IUH5 632 aa12.59□□□□□ -0.39
VPS33B-201ENST00000333371 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms