RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SIX6OS1Q8N1H7 587 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 AGR3Q8TD06 166 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 TTC1Q99614 292 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 PPM1HQ9ULR3 514 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 LOC100653049A0A140TA62 436 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 ZCWPW2A0A1B0GU75 182 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 MYBPHLA2RUH7 354 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 KRT34O76011 436 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 SERPINE1P05121 402 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 AOC1P19801 751 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 BEX3Q00994 111 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 STRA8Q7Z7C7 330 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 SPNS2Q8IVW8 549 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 CFAP61Q8NHU2 1237 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 EDEM1Q92611 657 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 MLPHQ9BV36 600 aaPredicted RBP13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 CHRAC1Q9NRG0 131 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 IGSF9Q9P2J2 1179 aa13.74□□□□□ -0.21
TUBA1B-201ENST00000332858 RALBP11234 206 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 GP5P40197 560 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ACTR3P61158 418 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ADAM17P78536 824 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 SV2CQ496J9 727 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 STXBP5Q5T5C0 1151 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 DNAAF3Q8N9W5 541 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ZMIZ2Q8NF64 920 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 SMOQ99835 787 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 TXNDC16Q9P2K2 825 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 APOBEC2Q9Y235 224 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 HTTP42858 3142 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 TSC2P49815 1807 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 PPP1R12AO14974 1030 aaPredicted RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 WARSP23381 471 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 CDK18Q07002 472 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 IQSEC1Q6DN90 963 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 FLRT1Q9NZU1 646 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 CPSF2Q9P2I0 782 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 NCAM1P13591 858 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 PNPLA4P41247 253 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 CCR10P46092 362 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 MFSD10Q14728 455 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 TMEM154Q6P9G4 183 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 NET1Q7Z628 596 aaPredicted RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 PSTKQ8IV42 348 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ARHGAP24Q8N264 748 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 ZNF781Q8N8C0 355 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 MAPK15Q8TD08 544 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 DDX43Q9NXZ2 648 aaKnown RBP13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 STAP1Q9ULZ2 295 aa13.73□□□□□ -0.21
TUBA1B-201ENST00000332858 KIF1CO43896 1103 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 PDE5AO76074 875 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 LTFP02788 710 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 CPA3P15088 417 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 ANPEPP15144 967 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 ABCE1P61221 599 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 KLC1Q07866 573 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 SEMA3BQ13214 749 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 RNF111Q6ZNA4 994 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 TMEM135Q86UB9 458 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 MYLK4Q86YV6 388 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 LMNTD2Q8IXW0 634 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 PHC3Q8NDX5 983 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 CELF6Q96J87 481 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 RBBP8Q99708 897 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 PTPN18Q99952 460 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 PAAF1Q9BRP4 392 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 SOX13Q9UN79 622 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 GABRDO14764 452 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 AP2A1O95782 977 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 BAG2O95816 211 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.214e-15■■■□□ 16.6
TUBA1B-201ENST00000332858 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 ANKRD20A4Q4UJ75 823 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 USP50Q70EL3 339 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 CCNJLQ8IV13 435 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 C3orf58Q8NDZ4 430 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 OR6Y1Q8NGX8 325 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 CPNE1Q99829 537 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 YIPF3Q9GZM5 350 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 DDIT4Q9NX09 232 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 DLGAP2Q9P1A6 1054 aa13.72□□□□□ -0.21
TUBA1B-201ENST00000332858 ARHGAP42A6NI28 874 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms