RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 FGFR3P22607 806 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 GPR107Q5VW38 600 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 SAMD3Q8N6K7 520 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 TDRD5Q8NAT2 981 aaKnown RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 ZSCAN18Q8TBC5 510 aaPredicted RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 CHURC1Q8WUH1 139 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 SREK1Q8WXA9 508 aaKnown RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 CDKL2Q92772 493 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 TOP1MTQ969P6 601 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 AKT1S1Q96B36 256 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 CCDC138Q96M89 665 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 XPNPEP3Q9NQH7 507 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 TRIM64BA6NI03 449 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 TMEM114B3SHH9 223 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 STX16-NPEPL1H3BU86 382 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 PLOD2O00469 737 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 APBA3O96018 575 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 CDH5P33151 784 aaPredicted RBP24.83■■□□□ 1.57
SOX1-201ENST00000330949 PRAMEP78395 509 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 RHDQ02161 417 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 PTK2BQ14289 1009 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 CYP2A13Q16696 494 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 TRIM16LQ309B1 348 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 CPSF7Q8N684 471 aaKnown RBP24.83■■□□□ 1.57
SOX1-201ENST00000330949 PCYOX1LQ8NBM8 494 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 JOSD2Q8TAC2 188 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 TFAP2CQ92754 450 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 EFHD2Q96C19 240 aaPredicted RBP24.83■■□□□ 1.57
SOX1-201ENST00000330949 TSPAN18Q96SJ8 248 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 CIB1Q99828 191 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 PTPRJQ12913 1337 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 KPNA4O00629 521 aaPredicted RBP24.83■■□□□ 1.57
SOX1-201ENST00000330949 NOL3O60936 208 aaKnown RBP24.83■■□□□ 1.57
SOX1-201ENST00000330949 VAPBO95292 243 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 JAK1P23458 1154 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 MTX3Q5HYI7 312 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 ANKRD26P1Q6NSI1 321 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 ZBTB49Q6ZSB9 765 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 EFHD1Q9BUP0 239 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 TCEAL9Q9UHQ7 104 aa24.83■■□□□ 1.57
SOX1-201ENST00000330949 GOLGA8QA0A0J9YX86 632 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 GOLGA8OA6NCC3 632 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 GOLGA8NF8WBI6 632 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 RSBN1LQ6PCB5 846 aaPredicted RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 WDTC1Q8N5D0 677 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 BSNDQ8WZ55 320 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 ANKEF1Q9NU02 776 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 TMEM9Q9P0T7 183 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 SUCOQ9UBS9 1254 aaKnown RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 J3QRK9 145 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 CD247P20963 164 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 TRIM25Q14258 630 aaKnown RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 SIX6OS1Q8N1H7 587 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 MPP5Q8N3R9 675 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 FBXL8Q96CD0 374 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 IMPG2Q9BZV3 1241 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 RAVER2Q9HCJ3 691 aaKnown RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 DUS2Q9NX74 493 aaKnown RBP24.82■■□□□ 1.56
SOX1-201ENST00000330949 ARID2Q68CP9 1835 aa24.82■■□□□ 1.56
SOX1-201ENST00000330949 ENTPD3O75355 529 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 MIPP30301 263 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 WNT7BP56706 349 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 TAF5Q15542 800 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 TAMM41Q96BW9 452 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 ACO2Q99798 780 aaKnown RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 HGH1Q9BTY7 390 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 C1orf50Q9BV19 199 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 PRDM16Q9HAZ2 1276 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 C20orf96Q9NUD7 363 aaPredicted RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 RBAKQ9NYW8 714 aaPredicted RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 SEPT3Q9UH03 358 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 TRIM64A6NGJ6 449 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 AQP9O43315 295 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 ERBB2P04626 1255 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 MFSD4BQ5TF39 518 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 FRA10AC1Q70Z53 315 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 ARMCX6Q7L4S7 300 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 CNTD1Q8N815 330 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 TMA16Q96EY4 203 aaKnown RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 MMRN1Q13201 1228 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 LSM12Q3MHD2 195 aaKnown RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 PPP4R4Q6NUP7 873 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 C4orf22Q6V702 233 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 SLC15A4Q8N697 577 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 MRIQ9BWK5 157 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 DRC3Q9H069 523 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 WDR55Q9H6Y2 383 aaPredicted RBP24.81■■□□□ 1.56
SOX1-201ENST00000330949 ADA2Q9NZK5 511 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 USP18Q9UMW8 372 aa24.81■■□□□ 1.56
SOX1-201ENST00000330949 MAFGO15525 162 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 KDM1AO60341 852 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 PABPC1P11940 636 aaKnown RBP24.8■■□□□ 1.56
SOX1-201ENST00000330949 ITGADQ13349 1161 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 PMS2P3Q13401 168 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 RAB39AQ14964 217 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 TTC30AQ86WT1 665 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 HERC6Q8IVU3 1022 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 FAM156AQ8NDB6 213 aa24.8■■□□□ 1.56
SOX1-201ENST00000330949 UHRF1Q96T88 793 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms