RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 C2CD2LO14523 706 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 MAFKO60675 156 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 FAM155BO75949 473 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 AP2A1O95782 977 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 IGLV3-27P01718 113 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 NFKB1P19838 968 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 SESN2P58004 480 aaPredicted RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 MIB1Q86YT6 1006 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 LRRC34Q8IZ02 419 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 GSDMBQ8TAX9 411 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 CKAP2Q8WWK9 683 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 TRIM43Q96BQ3 446 aaPredicted RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 OXNAD1Q96HP4 312 aaPredicted RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 UBE2OQ9C0C9 1292 aaKnown RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 MOCS1Q9NZB8 636 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 PRDM4Q9UKN5 801 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 LTBP2Q14767 1821 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 TYROBPO43914 113 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 SLC18A1P54219 525 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 OTOP3Q7RTS5 596 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 PPM1NQ8N819 430 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 ARMC5Q96C12 935 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 SMC6Q96SB8 1091 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 VANGL2Q9ULK5 521 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 MAGED2Q9UNF1 606 aaPredicted RBP17.36■□□□□ 0.37
DDX41-201ENST00000330503 SLC12A8A0AV02 714 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 FAM159BA6NKW6 160 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 CACNG3O60359 315 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 UGT1A9O60656 530 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ABLIM3O94929 683 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 TIMP1P01033 207 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SOD2P04179 222 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 HMBSP08397 361 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 CSF2RAP15509 400 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 FBXO46Q6PJ61 603 aaPredicted RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 CYS1Q717R9 158 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SLC26A11Q86WA9 606 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SLC39A11Q8N1S5 342 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ATP6V0D2Q8N8Y2 350 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 OR52K1Q8NGK4 314 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 GDAP1Q8TB36 358 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 USP33Q8TEY7 942 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ZNF419Q96HQ0 510 aaPredicted RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 BTN2A3PQ96KV6 586 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 C11orf49Q9H6J7 331 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 UGT1A7Q9HAW7 530 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 UGT1A10Q9HAW8 530 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 UGT1A8Q9HAW9 530 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ARHGAP42A6NI28 874 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 USP12O75317 370 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 CNTN5O94779 1100 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 CCNB1P14635 433 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 KRT4P19013 534 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 RPA3P35244 121 aaPredicted RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 TUFMP49411 452 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 SPOUT1Q5T280 376 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 ITPRIPL1Q6GPH6 555 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 KIAA1841Q6NSI8 718 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SH2D5Q6ZV89 423 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 LRRC6Q86X45 466 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 UNC5BQ8IZJ1 945 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ATPAF2Q8N5M1 289 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 IL12RB2Q99665 862 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SSU72Q9NP77 194 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 CASS4Q9NQ75 786 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 SYBUQ9NX95 663 aa17.35■□□□□ 0.37
DDX41-201ENST00000330503 PPARGC1AQ9UBK2 798 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 AFF4Q9UHB7 1163 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 SMG5Q9UPR3 1016 aaKnown RBP17.35■□□□□ 0.37
DDX41-201ENST00000330503 IGLV3-10A0A075B6K4 115 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 EBAG9O00559 213 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 MATN3O15232 486 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 TLR5O60602 858 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 ALDH1A2O94788 518 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 ASMTLO95671 621 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 INHBAP08476 426 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 CSH1P0DML2 217 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 CSH2P0DML3 217 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 PAPOLAP51003 745 aaKnown RBP17.34■□□□□ 0.37
DDX41-201ENST00000330503 DSG1Q02413 1049 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 ALFQ53S48 1182 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 CPLX4Q7Z7G2 160 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 CTAGE3PQ8IX95 158 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 KLHDC8BQ8IXV7 354 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 DYDC1Q8WWB3 177 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 IGSF8Q969P0 613 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 SERAC1Q96JX3 654 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 CEP295NLQ96MC4 621 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 ZNF558Q96NG5 402 aa17.34■□□□□ 0.37
DDX41-201ENST00000330503 NYNRINQ9P2P1 1898 aaKnown RBP17.34■□□□□ 0.37
DDX41-201ENST00000330503 IQANK1A0A1B0GTG1 560 aa17.33■□□□□ 0.37
DDX41-201ENST00000330503 DRGXA6NNA5 263 aa17.33■□□□□ 0.37
DDX41-201ENST00000330503 RHOQP17081 205 aa17.33■□□□□ 0.37
DDX41-201ENST00000330503 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.37
DDX41-201ENST00000330503 WDR5P61964 334 aaKnown RBP17.33■□□□□ 0.37
DDX41-201ENST00000330503 RING1Q06587 406 aa17.33■□□□□ 0.37
DDX41-201ENST00000330503 SLC1A5Q15758 541 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms