RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 STAT6P42226 847 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 PSEN1P49768 467 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 ST8SIA6P61647 398 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 EFEMP1Q12805 493 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 SETMARQ53H47 684 aaPredicted RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 C9orf64Q5T6V5 341 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 SV2BQ7L1I2 683 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 RAB11FIP2Q7L804 512 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 DSG4Q86SJ6 1040 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 WDR48Q8TAF3 677 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 TNIP3Q96KP6 325 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 CLIC6Q96NY7 704 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 CDK5RAP1Q96SZ6 601 aaKnown RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 STRA6Q9BX79 667 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 LRRC27Q9C0I9 530 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 ZNF71Q9NQZ8 489 aaPredicted RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 SEL1LQ9UBV2 794 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 SCN8AQ9UQD0 1980 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 NYNRINQ9P2P1 1898 aaKnown RBP15.33■□□□□ 0.05
CTHRC1-201ENST00000330295 CASC3O15234 703 aaKnown RBP15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 CUTAO60888 179 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 CCDC130P13994 396 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 UQCRFS1P47985 274 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 ME1P48163 572 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SPIDRQ14159 915 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 MCM6Q14566 821 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 ARID5BQ14865 1188 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SURF1Q15526 300 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 PERM1Q5SV97 790 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SCD5Q86SK9 330 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 TRIM69Q86WT6 500 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SFR1Q86XK3 245 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 GPD1LQ8N335 351 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 TMEM145Q8NBT3 493 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 C9orf43Q8TAL5 461 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 FAM129BQ96TA1 746 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 PCDHB11Q9Y5F2 797 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 PCDHA5Q9Y5H7 936 aa15.33■□□□□ 0.04
CTHRC1-201ENST00000330295 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 HGFP14210 728 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 CD70P32970 193 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 CALN1Q9BXU9 219 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 EPB41L5Q9HCM4 733 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 BLOC1S4Q9NUP1 217 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 FAM13BQ9NYF5 915 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
CTHRC1-201ENST00000330295 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 RNGTTO60942 597 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 KRT7P08729 469 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 GRNP28799 593 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 DRD3P35462 400 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 ZNF445P59923 1031 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 AMPD3Q01432 767 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 ZNF542PQ5EBM4 170 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 B3GNT8Q7Z7M8 397 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 ACOT1Q86TX2 421 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 ZFAND4Q86XD8 727 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 FAM131CQ96AQ9 280 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 TMA16Q96EY4 203 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 SMYD3Q9H7B4 428 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 SYNDIG1Q9H7V2 258 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 DNAJC28Q9NX36 388 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 PISDQ9UG56 409 aa15.31■□□□□ 0.04
CTHRC1-201ENST00000330295 EDDM13A0A1B0GTR0 161 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MUSKO15146 869 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 IL1BP01584 269 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 JMJD7P0C870 316 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 GAP43P17677 238 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 HNRNPKP61978 463 aaKnown RBP eCLIP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 KRT85P78386 507 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 NR0B2Q15466 257 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 CAPRIN2Q6IMN6 1127 aaKnown RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MAMDC2Q7Z304 686 aaPredicted RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 CCDC186Q7Z3E2 898 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 KDM1BQ8NB78 822 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 ZNF548Q8NEK5 533 aaPredicted RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 TTC17Q96AE7 1141 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 PLD4Q96BZ4 506 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MRGPRX3Q96LB0 322 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MYOCQ99972 504 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms