RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ZNF438Q7Z4V0 828 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RAD21L1Q9H4I0 556 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RGS18Q9NS28 235 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 NAALADL1Q9UQQ1 740 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 RGPD1P0DJD0 1748 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 TBC1D4O60343 1298 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 FCGR1AP12314 374 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ZCWPW2Q504Y3 356 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 FAM45BPQ6NSW5 357 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 APLFQ8IW19 511 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 FAM45AQ8TCE6 357 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 CELF6Q96J87 481 aaKnown RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 THAP1Q9NVV9 213 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PCDHA11Q9Y5I1 949 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 PTPN9P43378 593 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 WLSQ5T9L3 541 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 CENPTQ96BT3 561 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 ATP13A3Q9H7F0 1226 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-201ENST00000328300 TAGLN3Q9UI15 199 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
COL4A5-201ENST00000328300 CNTNAP1P78357 1384 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 ADGRA2Q96PE1 1338 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 TMEM191CA6NGB0 347 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 SCNN1AP37088 669 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 LRRC34Q8IZ02 419 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 LAMB4A4D0S4 1761 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 B4GALT5O43286 388 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 PCSK2P16519 638 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 SMPD1P17405 629 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 HADHBP55084 474 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 FAM187BQ17R55 369 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 NPAS4Q8IUM7 802 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 TEX9Q8N6V9 391 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 GFM2Q969S9 779 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 QRFPRQ96P65 431 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 C15orf38-AP3S2A0A0A6YYH1 394 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 H3BQF6 201 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 CLDN11O75508 207 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MTA2O94776 668 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MGAT1P26572 445 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 ARPINQ7Z6K5 226 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 PGLYRP2Q96PD5 576 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 FZD8Q9H461 694 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 ELOVL6Q9H5J4 265 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 GNPTGQ9UJJ9 305 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 HNRNPCL2B2RXH8 293 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 GLUD1P00367 558 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 FGF1P05230 155 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 RBL1P28749 1068 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 CCR3P51677 355 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 ANKS6Q68DC2 871 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 DMAC2Q9NW81 257 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MAN1A2O60476 641 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MLNP12872 115 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 HDCP19113 662 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 HLA-DPA1P20036 260 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MMP8P22894 467 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 PARP15Q460N3 678 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 PURBQ96QR8 312 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 HNRNPABQ99729 332 aaKnown RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 CATSPERZQ9NTU4 200 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 MARCOQ9UEW3 520 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-201ENST00000328300 AURKCQ9UQB9 309 aa11.63□□□□□ -0.55
COL4A5-201ENST00000328300 A0A088AWK7 358 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FGFR1P11362 822 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ZNF10P21506 573 aaPredicted RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 TTPAP49638 278 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 POTEHQ6S545 545 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FBXO39Q8N4B4 442 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 PIK3R5Q8WYR1 880 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 KAT5Q92993 513 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ART4Q93070 314 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 BTN2A3PQ96KV6 586 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 MPP6Q9NZW5 540 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 WARS2Q9UGM6 360 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 GUCY1B2O75343 617 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 TRIM16O95361 564 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ARIH2O95376 493 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 C22orf31O95567 290 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 PSMA4P25789 261 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 HALP42357 657 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 PCYT1AP49585 367 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FBXW4P57775 412 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FNDC3BQ53EP0 1204 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ECSITQ9BQ95 431 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ZC4H2Q9NQZ6 224 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 RBPJLQ9UBG7 517 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms