RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 DNAJC17Q9NVM6 304 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 UBA2Q9UBT2 640 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GGA2Q9UJY4 613 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PLA2G4CQ9UP65 541 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 hCG_1818297A0A087WSY0 165 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ANXA9O76027 345 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PRNPP04156 253 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 OR1E1P30953 314 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 HOXA6P31267 233 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CCR2P41597 374 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 IFI35P80217 286 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 HNRNPDQ14103 355 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 DPYSL3Q14195 570 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ZDHHC20Q5W0Z9 365 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 AFMIDQ63HM1 303 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SCARA3Q6AZY7 606 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TANGO2Q6ICL3 276 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 FBXL22Q6P050 247 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RABEPKQ7Z6M1 372 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SLC44A3Q8N4M1 653 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TERB1Q8NA31 727 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GPR152Q8TDT2 470 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TFB1MQ8WVM0 346 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RAB7BQ96AH8 199 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ELMO3Q96BJ8 720 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GDAP1L1Q96MZ0 367 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 KCTD15Q96SI1 283 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 C1QTNF1Q9BXJ1 281 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PACSIN1Q9BY11 444 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PHACTR1Q9C0D0 580 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RAB17Q9H0T7 212 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 OSER1Q9NX31 292 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PAK5Q9P286 719 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 BCLAF3A2AJT9 711 aaKnown RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SPECC1L-ADORA2AF8WAN1 911 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TOR1BO14657 336 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 BUB1O43683 1085 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 LRIG2O94898 1065 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ADH1BP00325 375 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 HMBSP08397 361 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 C7P10643 843 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TYRP14679 529 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CCR3P51677 355 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 GEMP55040 296 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ZXDAP98168 799 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF235Q14590 738 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 C15orf59Q2T9L4 293 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TTC31Q49AM3 519 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SLC44A4Q53GD3 710 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 OTUD1Q5VV17 481 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF572Q7Z3I7 529 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 LINC00523Q86TU6 105 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SLC13A5Q86YT5 568 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 BBS7Q8IWZ6 715 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 TMEM130Q8N3G9 435 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CARNMT1Q8N4J0 409 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PPM1EQ8WY54 764 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 NKD2Q969F2 451 aaPredicted RBP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 QKIQ96PU8 341 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 RNF38Q9H0F5 515 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 SIK2Q9H0K1 926 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 KCNF1Q9H3M0 494 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 KDM4CQ9H3R0 1056 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 MFSD1Q9H3U5 465 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ABCB8Q9NUT2 735 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRIT3-201ENST00000327908 HACD3Q9P035 362 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 PDE4DIPQ5VU43 2346 aa5.3□□□□□ -1.56
LRIT3-201ENST00000327908 ANAPC1Q9H1A4 1944 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SYNJ2BP-COX16A0A087WUM0 186 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 RASA4BC9J798 803 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KCNK3O14649 394 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DCLK1O15075 740 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ATMINO43313 823 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 RASA4O43374 803 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CREB3O43889 395 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 FOXD2O60548 495 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SOCS5O75159 536 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CSPG5O95196 566 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PRAMEF12O95522 483 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DLDP09622 509 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CTHP32929 405 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CNR2P34972 360 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 GTF2F1P35269 517 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CDKN2BP42772 138 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 POLR2LP62875 67 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PDE1BQ01064 536 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 NOMO1Q15155 1222 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 LONRF2Q1L5Z9 754 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SLC45A4Q5BKX6 768 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 FAM133BQ5BKY9 247 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 LY6G5CQ5SRR4 150 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 HEATR6Q6AI08 1181 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SPRED2Q7Z698 418 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KBTBD6Q86V97 674 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms