RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 KLHL41O60662 606 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 CCL5P13501 91 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 CCNB1P14635 433 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 HALP42357 657 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 PLK1P53350 603 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 SLC5A3P53794 718 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 KCNK10P57789 538 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 PABPC1LQ4VXU2 614 aaKnown RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 RFWD3Q6PCD5 774 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 TSEN2Q8NCE0 465 aaKnown RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 ST13P5Q8NFI4 369 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 CLEC4CQ8WTT0 213 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 MAGEB10Q96LZ2 347 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 SRPK1Q96SB4 655 aaKnown RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 KCTD15Q96SI1 283 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 NDNQ99608 321 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 ARHGAP39Q9C0H5 1083 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 FBXO6Q9NRD1 293 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-201ENST00000324501 ITM2BQ9Y287 266 aa7.41□□□□□ -1.22
PSEN1-201ENST00000324501 HACD1B0YJ81 288 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 B2RBV5 119 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 M0R2N6 131 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PAPSS1O43252 624 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 H2AFYO75367 372 aaKnown RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 GLUD2P49448 558 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 IRAK1P51617 712 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ACLYP53396 1101 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 SMARCB1Q12824 385 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 CAMK2GQ13555 558 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 SPANXN3Q5MJ09 141 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 GPR158Q5T848 1215 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ARMC12Q5T9G4 340 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 C16orf46Q6P387 395 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TRPM8Q7Z2W7 1104 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 HHIPL1Q96JK4 782 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 RNF157Q96PX1 679 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 KCNK16Q96T55 309 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 GMLQ99445 158 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TCF25Q9BQ70 676 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 FRMD8Q9BZ67 464 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ASPSCR1Q9BZE9 553 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.4□□□□□ -1.221e-9■■■■■ 54.1
PSEN1-201ENST00000324501 MTO1Q9Y2Z2 717 aaKnown RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 DERAQ9Y315 318 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TPP1O14773 563 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PHGDHO43175 533 aaKnown RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 GLUD1P00367 558 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 KCNA3P22001 575 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 NUDT2P50583 147 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 HIST2H2ACQ16777 129 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 HIST2H2AA3Q6FI13 130 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PYROXD2Q8N2H3 581 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 LRRC52Q8N7C0 313 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ARNTL2Q8WYA1 636 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PCED1BQ96HM7 432 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TEPSINQ96N21 525 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 POLR1EQ9GZS1 481 aaKnown RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 MINDY3Q9H8M7 445 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PPCSQ9HAB8 311 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 HEY2Q9UBP5 337 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 Q9Y3F1 56 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PCDHGC5Q9Y5F6 944 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 MYO1CO00159 1063 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 HCRTO43612 131 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 VNN1O95497 513 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 CSH1P0DML2 217 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 CSH2P0DML3 217 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 CD151P48509 253 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PFKPQ01813 784 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 PMF1Q6P1K2 205 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 KDM7AQ6ZMT4 941 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ALLCQ8N6M5 410 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TFAP2BQ92481 460 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 MAGEB18Q96M61 343 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 BBS2Q9BXC9 721 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 ILKAPQ9H0C8 392 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-201ENST00000324501 TRHDEQ9UKU6 1024 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 VPS9D1Q9Y2B5 631 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 MYH2Q9UKX2 1941 aa7.4□□□□□ -1.22
PSEN1-201ENST00000324501 hCG_1818297A0A087WSY0 165 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 AKAP10O43572 662 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 CPSF4O95639 269 aaKnown RBP7.4□□□□□ -1.23
PSEN1-201ENST00000324501 TFE3P19532 575 aaPredicted RBP7.4□□□□□ -1.23
PSEN1-201ENST00000324501 MATKP42679 507 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 GATMP50440 423 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 AQP5P55064 265 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 GRTP1Q5TC63 336 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 FBXL19Q6PCT2 694 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 KIAA1324Q6UXG2 1013 aaKnown RBP7.4□□□□□ -1.23
PSEN1-201ENST00000324501 PRR23CQ6ZRP0 262 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 OTOAQ7RTW8 1153 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 FAM228AQ86W67 206 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 OOSP2Q86WS3 158 aa7.4□□□□□ -1.23
PSEN1-201ENST00000324501 SLC4A11Q8NBS3 891 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms