RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 ZBTB49Q6ZSB9 765 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 OFCC1Q8IZS5 231 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 SLC15A4Q8N697 577 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 SAMD3Q8N6K7 520 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
PDE1C-201ENST00000321453 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
PDE1C-201ENST00000321453 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 COL5A3P25940 1745 aaPredicted RBP16.92■□□□□ 0.3
PDE1C-201ENST00000321453 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 C1orf232A0A0U1RR37 186 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 A8MU76 341 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.92■□□□□ 0.3
PDE1C-201ENST00000321453 EDN1P05305 212 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 RCVRNP35243 200 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 CDH8P55286 799 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 CREB5Q02930 508 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 OLIG2Q13516 323 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 ZNF829Q3KNS6 432 aaPredicted RBP16.92■□□□□ 0.3
PDE1C-201ENST00000321453 PITRM1Q5JRX3 1037 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 CCDC80Q76M96 950 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 SNX29P2Q8IUI4 249 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 PGAM4Q8N0Y7 254 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 DCDC2Q9UHG0 476 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 SQORQ9Y6N5 450 aa16.92■□□□□ 0.3
PDE1C-201ENST00000321453 ZNF839A8K0R7 811 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 KCNU1A8MYU2 1149 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 STILQ15468 1287 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 HIPK3Q9H422 1215 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 FAM96AQ9H5X1 160 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 LSM8O95777 96 aaKnown RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 MX2P20592 715 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 MGAT1P26572 445 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 CA9Q16790 459 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 Q3C1V9 767 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 ZBED5Q49AG3 693 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 HMBOX1Q6NT76 420 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 C17orf50Q8WW18 174 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 TANKQ92844 425 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 TAAR1Q96RJ0 339 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 POLR1BQ9H9Y6 1135 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 BCAP29Q9UHQ4 241 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 CNTN6Q9UQ52 1028 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 TMEM233B4DJY2 109 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 AKAP10O43572 662 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 KCNH1O95259 989 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 FSTL1Q12841 308 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 GALNT18Q6P9A2 607 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 XYLT1Q86Y38 959 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 ZC3H7AQ8IWR0 971 aaKnown RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 ADPGKQ9BRR6 497 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 SOX17Q9H6I2 414 aaPredicted RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
PDE1C-201ENST00000321453 SNX15Q9NRS6 342 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 VPS51Q9UID3 782 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 SLC8A2Q9UPR5 921 aa16.91■□□□□ 0.3
PDE1C-201ENST00000321453 GLRBP48167 497 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 SWSAP1Q6NVH7 229 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 RP9Q8TA86 221 aaKnown RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 DLG3Q92796 817 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 GATA5Q9BWX5 397 aaPredicted RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 TMED5Q9Y3A6 229 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 E7ENX8 843 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 WDR46O15213 610 aaKnown RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 CSE1LP55060 971 aaKnown RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 OSTNP61366 133 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 CLDN10P78369 228 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 GBE1Q04446 702 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 SEPT6Q14141 434 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 RAB39AQ14964 217 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 PERM1Q5SV97 790 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 TREML2Q5T2D2 321 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 TIFABQ6ZNK6 161 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 LPGAT1Q92604 370 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 APBB2Q92870 758 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 SLCO4A1Q96BD0 722 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 DUS2Q9NX74 493 aaKnown RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 MOCS1Q9NZB8 636 aa16.9■□□□□ 0.3
PDE1C-201ENST00000321453 KIAA1522Q9P206 1035 aaPredicted RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 CCNL1Q9UK58 526 aaPredicted RBP16.9■□□□□ 0.3
PDE1C-201ENST00000321453 APOL1O14791 398 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 LYPLA2O95372 231 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 BMP10O95393 424 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 NR4A1P22736 598 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 SOX11P35716 441 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 MCCD1P59942 119 aaPredicted RBP16.89■□□□□ 0.29
PDE1C-201ENST00000321453 TFAMQ00059 246 aaKnown RBP16.89■□□□□ 0.29
PDE1C-201ENST00000321453 TRNP1Q6NT89 227 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 TMEM126BQ8IUX1 230 aa16.89■□□□□ 0.29
PDE1C-201ENST00000321453 SPNS2Q8IVW8 549 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms