RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ITGA2BP08514 1039 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 IL1R2P27930 398 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ARHGEF7Q14155 803 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 PFKFB4Q16877 469 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ATP6V0D2Q8N8Y2 350 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF333Q96JL9 665 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 BPIFA1Q9NP55 256 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 SEMA4BQ9NPR2 832 aaPredicted RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 AKAP12Q02952 1782 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 TREHO43280 583 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 NOS2P35228 1153 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 TBX4P57082 545 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 UBE3AQ05086 875 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 DLG2Q15700 870 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 FAM13CQ8NE31 585 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ASPSCR1Q9BZE9 553 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 STARD13Q9Y3M8 1113 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 PCDHB7Q9Y5E2 793 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ASCC3Q8N3C0 2202 aaKnown RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 GLP2RO95838 553 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 CD52P31358 61 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 CD86P42081 329 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 TRMT5Q32P41 509 aaKnown RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 C4orf22Q6V702 233 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 OTOP3Q7RTS5 596 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 FAM162AQ96A26 154 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 POMKQ9H5K3 350 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 MRPL40Q9NQ50 206 aaKnown RBP16.8■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 SLC13A4Q9UKG4 626 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 SH3BP1Q9Y3L3 701 aa16.8■□□□□ 0.28
CLIP4-201ENST00000320081 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 MAGEA13PA6NCF6 341 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ZBTB24O43167 697 aaPredicted RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 FMO4P31512 558 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 INPP1P49441 399 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 CCNJLQ8IV13 435 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 MSL3Q8N5Y2 521 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 SPATA22Q8NHS9 363 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 RSPH1Q8WYR4 309 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 DMAP1Q9NPF5 467 aaPredicted RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 CHRAC1Q9NRG0 131 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 TMPRSS4Q9NRS4 437 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 PKD2L2Q9NZM6 624 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 LINC00854A0A1B0GVQ3 168 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 OLIG2Q13516 323 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 DMC1Q14565 340 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 POM121L1PQ3SYA9 428 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ANKRD52Q8NB46 1076 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 TRPC5OSA6NMA1 111 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 F8W8V4 182 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 PSMD3O43242 534 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ATP6V1B2P21281 511 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 WDR4P57081 412 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 CLNKQ7Z7G1 428 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 SLC4A11Q8NBS3 891 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 HBEGFQ99075 208 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 TBCDQ9BTW9 1192 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ZDHHC18Q9NUE0 388 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 PEX11AO75192 247 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 ARIH2O95376 493 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 PSMG1O95456 288 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 CRYMQ14894 314 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 UBAP2Q5T6F2 1119 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 LGI2Q8N0V4 545 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 CCDC185Q8N715 623 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 UBE2OQ9C0C9 1292 aaKnown RBP16.79■□□□□ 0.28
CLIP4-201ENST00000320081 XPR1Q9UBH6 696 aa16.79■□□□□ 0.28
CLIP4-201ENST00000320081 C2orf81A6NN90 581 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 MFSD11O43934 449 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SHOX2O60902 331 aaPredicted RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 CLPTM1O96005 669 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 UNGP13051 313 aaPredicted RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SLC11A2P49281 568 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 OXCT1P55809 520 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 SEMA5AQ13591 1074 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 MAPRE1Q15691 268 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 CFAP52Q8N1V2 620 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
CLIP4-201ENST00000320081 ATP13A1Q9HD20 1204 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
CLIP4-201ENST00000320081 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms