RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PI4KAP42356 2102 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 LRRC72A6NJI9 287 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 GJB3O75712 270 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 RNASEH2AO75792 299 aaKnown RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 ADH1BP00325 375 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 C5AR1P21730 350 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 MZF1P28698 734 aaPredicted RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 SULT1E1P49888 294 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 VASPP50552 380 aaPredicted RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 CDH4P55283 916 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 ELAVL3Q14576 367 aaKnown RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 KRT31Q15323 416 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 CDKAL1Q5VV42 579 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 KIAA0895LQ68EN5 471 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 DSG4Q86SJ6 1040 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 NOP9Q86U38 636 aaKnown RBP18.28■□□□□ 0.52
TPM1-203ENST00000317516 XYLT1Q86Y38 959 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 PTPRN2Q92932 1015 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 NT5C3BQ969T7 300 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 FAM129BQ96TA1 746 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 FEM1AQ9BSK4 669 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 PIGVQ9NUD9 493 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 SLC25A13Q9UJS0 675 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 FZD4Q9ULV1 537 aa18.28■□□□□ 0.52
TPM1-203ENST00000317516 A0A1W2PP55 124 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 FAM47DPA6NHR8 397 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 MID1O15344 667 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 SH3BP5O60239 455 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 TRIM16O95361 564 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 ZNF883P0CG24 379 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 CSNK1EP49674 416 aaKnown RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 POLR2FP61218 127 aaKnown RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 CENPCQ03188 943 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 SUZ12Q15022 739 aaKnown RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 HLA-BQ31612 363 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 C5orf22Q49AR2 442 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 CXorf57Q6NSI4 855 aaKnown RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 STK40Q8N2I9 435 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 CPA5Q8WXQ8 436 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 SKA1Q96BD8 255 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 C1orf74Q96LT6 269 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 SPAG5Q96R06 1193 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 NEUROG2Q9H2A3 272 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 FANCLQ9NW38 375 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 VPS28Q9UK41 221 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 TPX2Q9ULW0 747 aaKnown RBP18.27■□□□□ 0.52
TPM1-203ENST00000317516 TBC1D30Q9Y2I9 924 aa18.27■□□□□ 0.52
TPM1-203ENST00000317516 CKAP5Q14008 2032 aa18.27■□□□□ 0.51
TPM1-203ENST00000317516 TNRC6BQ9UPQ9 1833 aaKnown RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 SPAARA0A1B0GVQ0 90 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 A0A1B0GVT2 93 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 GFPT2O94808 682 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 ADCY5O95622 1261 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 IL1BP01584 269 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 MMEP08473 750 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 ZNF18P17022 549 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 GOT1P17174 413 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 GRIA4P48058 902 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 PSMD8P48556 350 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 STK19P49842 368 aaPredicted RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 GALCP54803 685 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 KRT83P78385 493 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 TRIP6Q15654 476 aaKnown RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 ST3GAL2Q16842 350 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 FAM46CQ5VWP2 391 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 NAA35Q5VZE5 725 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 ARCQ7LC44 396 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 ADAT2Q7Z6V5 191 aaKnown RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 NAXDQ8IW45 347 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 OR2T34Q8NGX1 318 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 OR8D1Q8WZ84 308 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 PCMTD1Q96MG8 357 aaPredicted RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 TBCBQ99426 244 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 MUC3BQ9H195 1237 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 GANQ9H2C0 597 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 TM9SF3Q9HD45 589 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 TM7SF3Q9NS93 570 aa18.26■□□□□ 0.51
TPM1-203ENST00000317516 FARP1Q9Y4F1 1045 aaPredicted RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 ASCC3Q8N3C0 2202 aaKnown RBP18.26■□□□□ 0.51
TPM1-203ENST00000317516 GOLGA8SH3BPF8 625 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 ATP9BO43861 1147 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 SOX5P35711 763 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 STAT1P42224 750 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 NOMO3P69849 1222 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 CDR2Q01850 454 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 MYL5Q02045 173 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 STX1AQ16623 288 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 ZNF423Q2M1K9 1284 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 NCEH1Q6PIU2 408 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 TRIM72Q6ZMU5 477 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 C14orf80Q86SX3 495 aa18.25■□□□□ 0.51
TPM1-203ENST00000317516 SETD3Q86TU7 594 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms