RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 CSHL1Q14406 222 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 TTLL9Q3SXZ7 439 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 RBM23Q86U06 439 aaKnown RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 CYP4F12Q9HCS2 524 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 RBM22Q9NW64 420 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 ARMCX1Q9P291 453 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 CNTNAP2Q9UHC6 1331 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 NCF1BA6NI72 391 aaPredicted RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 NCF1CA8MVU1 366 aaPredicted RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 EDF1O60869 148 aaKnown RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 VPS26AO75436 327 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 NCF1P14598 390 aaPredicted RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 BLVRAP53004 296 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 MAP3K10Q02779 954 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 TAF2Q6P1X5 1199 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 VPS37AQ8NEZ2 397 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 RIN3Q8TB24 985 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 LGALS13Q9UHV8 139 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 SLC15A5A6NIM6 579 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 BIRC5O15392 142 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 PSMG1O95456 288 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 POMCP01189 267 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 SOAT1P35610 550 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 WASHC5Q12768 1159 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 XRCC4Q13426 336 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 EDEM1Q92611 657 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 RBBP8Q99708 897 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 TRPM5Q9NZQ8 1165 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
SPOCK2-201ENST00000317376 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 RGPD5Q99666 1765 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 WFS1O76024 890 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TRIM16O95361 564 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ARIH2O95376 493 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 CRTAMO95727 393 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 INHAP05111 366 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 PSEN2P49810 448 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 FNIP1Q8TF40 1166 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 COPS5Q92905 334 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 CELF6Q96J87 481 aaKnown RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 GLP2RO95838 553 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TFE3P19532 575 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ICAM3P32942 547 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 MTA1Q13330 715 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 NKD2Q969F2 451 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ZNF556Q9HAH1 456 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 LRRC4CQ9HCJ2 640 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 NT5MQ9NPB1 228 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 DMAP1Q9NPF5 467 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 UBDO15205 165 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TPH1P17752 444 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 GRM5P41594 1212 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 OXCT1P55809 520 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 NCALDP61601 193 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 POU6F1Q14863 301 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ZCCHC23Q6ZST2 131 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TSHZ1Q6ZSZ6 1077 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ITIH5Q86UX2 942 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 CARNMT1Q8N4J0 409 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 B4GALNT2Q8NHY0 566 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 EBNA1BP2Q99848 306 aaKnown RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 NMRAL1Q9HBL8 299 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 DERAQ9Y315 318 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 MAFBQ9Y5Q3 323 aaPredicted RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 MEI4A8MW99 385 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 LTFP02788 710 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 YBX3P16989 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 IRGCQ6NXR0 463 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TRIM48Q8IWZ4 208 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 JOSD2Q8TAC2 188 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 TSPAN18Q96SJ8 248 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 THUMPD3Q9BV44 507 aaKnown RBP13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
SPOCK2-201ENST00000317376 B4GALT5O43286 388 aa13.74□□□□□ -0.21
SPOCK2-201ENST00000317376 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms