RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 TSGA13Q96PP4 275 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 MLPHQ9BV36 600 aaPredicted RBP19.51■□□□□ 0.71
CD55-201ENST00000314754 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 TRIM55Q9BYV6 548 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 MYLK2Q9H1R3 596 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 STARD7Q9NQZ5 370 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 SFMBT1Q9UHJ3 866 aa19.51■□□□□ 0.71
CD55-201ENST00000314754 ARHGAP42A6NI28 874 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 MSI1O43347 362 aaKnown RBP19.5■□□□□ 0.71
CD55-201ENST00000314754 USP12O75317 370 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 TGDSO95455 350 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 CCNB1P14635 433 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 NFKB1P19838 968 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 DNAAF3Q8N9W5 541 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 CERS2Q96G23 380 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 FAM193BQ96PV7 902 aaPredicted RBP19.5■□□□□ 0.71
CD55-201ENST00000314754 IL1RAPL1Q9NZN1 696 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 ZFATQ9P243 1243 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 DNAJB4Q9UDY4 337 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 NUDT5Q9UKK9 219 aa19.5■□□□□ 0.71
CD55-201ENST00000314754 PRG3Q9Y2Y8 225 aaPredicted RBP19.5■□□□□ 0.71
CD55-201ENST00000314754 NYNRINQ9P2P1 1898 aaKnown RBP19.49■□□□□ 0.71
CD55-201ENST00000314754 UNC5CO95185 931 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 JCHAINP01591 159 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 PLEKHG4Q58EX7 1191 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 LHX8Q68G74 356 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 TMEM135Q86UB9 458 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 RASSF3Q86WH2 238 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 LZTR1Q8N653 840 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 CAPNS2Q96L46 248 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 FCRL2Q96LA5 508 aaPredicted RBP19.49■□□□□ 0.71
CD55-201ENST00000314754 CATSPERBQ9H7T0 1116 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 NMUR1Q9HB89 426 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 TMEM161AQ9NX61 479 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 SCML2Q9UQR0 700 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 SYN3O14994 580 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 COL6A1P12109 1028 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 CCNCP24863 283 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 OVGP1Q12889 678 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 FRG1Q14331 258 aaKnown RBP19.49■□□□□ 0.71
CD55-201ENST00000314754 SDHAF4Q5VUM1 108 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 NLRP9Q7RTR0 991 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 MON1AQ86VX9 555 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 ARMC2Q8NEN0 867 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 KLHL29Q96CT2 875 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 TBC1D31Q96DN5 1066 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 C8orf48Q96LL4 319 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 SIRPGQ9P1W8 387 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 PSAT1Q9Y617 370 aa19.49■□□□□ 0.71
CD55-201ENST00000314754 A0A1W2PQH9 124 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 USP1O94782 785 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ALDOAP04075 364 aaKnown RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 PRPSAP1Q14558 356 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 SPDYAQ5MJ70 313 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 CES3Q6UWW8 571 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 TBC1D1Q86TI0 1168 aaPredicted RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 ARHGAP12Q8IWW6 846 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 NUP93Q8N1F7 819 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ATPAF2Q8N5M1 289 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 SERPINB11Q96P15 392 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 FCRL3Q96P31 734 aaPredicted RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 FBXO44Q9H4M3 255 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 TXLNGQ9NUQ3 528 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 TXNDC16Q9P2K2 825 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 TET1Q8NFU7 2136 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 KCNU1A8MYU2 1149 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 AP3B1O00203 1094 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 DFFAO00273 331 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 TADA2AO75478 443 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ITGA2BP08514 1039 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ERVK-10P10266 1014 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 GP5P40197 560 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ELF3P78545 371 aaPredicted RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 VARS2Q5ST30 1063 aaKnown RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 STXBP5Q5T5C0 1151 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 NAPEPLDQ6IQ20 393 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 KYAT3Q6YP21 454 aaKnown RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 LRRC8DQ7L1W4 858 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 ASRGL1Q7L266 308 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 KLHDC8BQ8IXV7 354 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 CNTD1Q8N815 330 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.48■□□□□ 0.71
CD55-201ENST00000314754 CPNE1Q99829 537 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
CD55-201ENST00000314754 DCTN4Q9UJW0 460 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 PLXNA3P51805 1871 aa19.48■□□□□ 0.71
CD55-201ENST00000314754 MAGEB16A2A368 324 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 MGRN1O60291 552 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 CACNG3O60359 315 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 TRPA1O75762 1119 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 ATP5HO75947 161 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 TOP3BO95985 862 aaKnown RBP19.47■□□□□ 0.71
CD55-201ENST00000314754 INHAP05111 366 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 NQO1P15559 274 aaKnown RBP19.47■□□□□ 0.71
CD55-201ENST00000314754 NPY2RP49146 381 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 GPR15P49685 360 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 NRG1Q02297 640 aaPredicted RBP19.47■□□□□ 0.71
CD55-201ENST00000314754 ARTNQ5T4W7 220 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 ATG16L1Q676U5 607 aa19.47■□□□□ 0.71
CD55-201ENST00000314754 ARHGAP36Q6ZRI8 547 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms