RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 KIF3CO14782 793 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 NRP1O14786 923 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 SPTLC1O15269 473 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 SHBGP04278 402 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 GPAMQ9HCL2 828 aa13.97□□□□□ -0.17
DDX54-202ENST00000314045 MYADML2A6NDP7 307 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 PRR23AA6NEV1 266 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 TULP2O00295 520 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 GLUD1P00367 558 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 AGO3Q9H9G7 860 aaKnown RBP13.96□□□□□ -0.17
DDX54-202ENST00000314045 SUPT7LO94864 414 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 ACRP10323 421 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 LPIN1Q14693 890 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.172e-8■■■■□ 26.2
DDX54-202ENST00000314045 SH3PXD2AQ5TCZ1 1133 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 PRSS55Q6UWB4 352 aaPredicted RBP13.96□□□□□ -0.17
DDX54-202ENST00000314045 BTN2A3PQ96KV6 586 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 SEMA3CQ99985 751 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 SLC4A5Q9BY07 1137 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 ADAMTS10Q9H324 1103 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX54-202ENST00000314045 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 MTO1Q9Y2Z2 717 aaKnown RBP13.96□□□□□ -0.17
DDX54-202ENST00000314045 KAT6AQ92794 2004 aa13.96□□□□□ -0.17
DDX54-202ENST00000314045 GSTA4O15217 222 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 HSPA8P11142 646 aaKnown RBP13.96□□□□□ -0.18
DDX54-202ENST00000314045 CD86P42081 329 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 PEX5P50542 639 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 PDPK2PQ6A1A2 396 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 UGT3A1Q6NUS8 523 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 TTC27Q6P3X3 843 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 CLEC20AQ6ZU45 233 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 CCDC185Q8N715 623 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 FGD4Q96M96 766 aa13.96□□□□□ -0.18
DDX54-202ENST00000314045 KCTD15Q96SI1 283 aaPredicted RBP13.96□□□□□ -0.18
DDX54-202ENST00000314045 BANF1O75531 89 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 SERPINH1P50454 418 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 IRF5Q13568 498 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 PLPP4Q5VZY2 271 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 PYROXD2Q8N2H3 581 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 TTC30BQ8N4P2 665 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 SCAMP5Q8TAC9 235 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 SNX19Q92543 992 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 MAGEB18Q96M61 343 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 CTNNAL1Q9UBT7 734 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 H0Y3Z8 333 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 SOAT2O75908 522 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 PIAS1O75925 651 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 ENO1P06733 434 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 ERVK-10P10266 1014 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 CPA3P15088 417 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 BCL2L1Q07817 233 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 CSHL1Q14406 222 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 NEPROQ6NW34 567 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 FUBP3Q96I24 572 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDX54-202ENST00000314045 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 ILKAPQ9H0C8 392 aaPredicted RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 THG1LQ9NWX6 298 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 RBM47A0AV96 593 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 HCRTO43612 131 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 LRIG2O94898 1065 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 IGSF6O95976 241 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 PTPN7P35236 360 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 ATXN1P54253 815 aaKnown RBP13.95□□□□□ -0.18
DDX54-202ENST00000314045 MAXP61244 160 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■□□□□ 10.6
DDX54-202ENST00000314045 ZNF284Q2VY69 593 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 CFAP52Q8N1V2 620 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 SHCBP1LQ9BZQ2 653 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 MSRAQ9UJ68 235 aa13.95□□□□□ -0.18
DDX54-202ENST00000314045 TBL1XO60907 577 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 FBXO22Q8NEZ5 403 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 SDCCAG3Q96C92 435 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 OXCT2Q9BYC2 517 aaPredicted RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 TM6SF2Q9BZW4 377 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 SYTL2Q9HCH5 934 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 CYP4F12Q9HCS2 524 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 ADA2Q9NZK5 511 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 PRRC2BQ5JSZ5 2229 aaKnown RBP13.94□□□□□ -0.18
DDX54-202ENST00000314045 ALOX15BO15296 676 aa13.94□□□□□ -0.18
DDX54-202ENST00000314045 INCA1Q0VD86 236 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms