RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 TUBB6Q9BUF5 446 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 PHACTR1Q9C0D0 580 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 CRISPLD1Q9H336 500 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 BLOC1S6Q9UL45 172 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 PCDHB5Q9Y5E4 795 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 MTCH2Q9Y6C9 303 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
VANGL1-201ENST00000310260 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 A0A1W2PPM1 405 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 F8W8V4 182 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 SEC24AO95486 1093 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 ASLP04424 464 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 SERPINB3P29508 390 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 GRIK1P39086 918 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 GRIA2P42262 883 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 RAB33AQ14088 237 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 KRT72Q14CN4 511 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 DDR2Q16832 855 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 FAM171BQ6P995 826 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
VANGL1-201ENST00000310260 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 ST13P4Q8IZP2 240 aaPredicted RBP13.04□□□□□ -0.32
VANGL1-201ENST00000310260 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF606Q8WXB4 792 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 MAK16Q9BXY0 300 aaKnown RBP13.04□□□□□ -0.32
VANGL1-201ENST00000310260 NSUN3Q9H649 340 aaKnown RBP13.04□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF510Q9Y2H8 683 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 IRAK3Q9Y616 596 aa13.04□□□□□ -0.32
VANGL1-201ENST00000310260 XIRP2A4UGR9 3374 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 LINC01565O15544 149 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 FAM200BP0CF97 657 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 VDRP11473 427 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 GZMAP12544 262 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 CYP11B1P15538 503 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 TPP2P29144 1249 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 GPR15P49685 360 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF132P52740 706 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 BPIFB4P59827 614 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 CDK16Q00536 496 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 IFRD2Q12894 506 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 C12orf76Q8N812 135 aaPredicted RBP13.03□□□□□ -0.32
VANGL1-201ENST00000310260 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 SPATA18Q8TC71 538 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 MIPOL1Q8TD10 442 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 GIPC2Q8TF65 315 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 HIC2Q96JB3 615 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
VANGL1-201ENST00000310260 M0QYV0 167 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 PIK3R2O00459 728 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.32
VANGL1-201ENST00000310260 VNN2O95498 520 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 ITGA2BP08514 1039 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 PGM1P36871 562 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 CLCN4P51793 760 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 HYAL1Q12794 435 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 FASTKD3Q14CZ7 662 aaKnown RBP13.02□□□□□ -0.32
VANGL1-201ENST00000310260 TTC7BQ86TV6 843 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 CCDC89Q8N998 374 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 PKMYT1Q99640 499 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 MIS12Q9H081 205 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 SSU72Q9NP77 194 aaKnown RBP13.02□□□□□ -0.32
VANGL1-201ENST00000310260 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 MAN1C1Q9NR34 630 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 NDE1Q9NXR1 346 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 HSFX1Q9UBD0 423 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 TSPAN16Q9UKR8 245 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 CNTN6Q9UQ52 1028 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
VANGL1-201ENST00000310260 RFPL2O75678 378 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 BEST1O76090 585 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 ABLIM3O94929 683 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 PIM1P11309 404 aaPredicted RBP13.02□□□□□ -0.33
VANGL1-201ENST00000310260 FOSL2P15408 326 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 VAV1P15498 845 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 CENPCQ03188 943 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 KLF1Q13351 362 aaPredicted RBP13.02□□□□□ -0.33
VANGL1-201ENST00000310260 C1QTNF12Q5T7M4 302 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 DENND1BQ6P3S1 775 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 RFX8Q6ZV50 586 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.33
VANGL1-201ENST00000310260 TMEM120AQ9BXJ8 343 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
VANGL1-201ENST00000310260 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.33
VANGL1-201ENST00000310260 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms