RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 KCTD19Q17RG1 926 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 BBS9Q3SYG4 887 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 TTC39BQ5VTQ0 682 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 ZBED8Q8IZ13 594 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 LGI2Q8N0V4 545 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 ATP11CQ8NB49 1132 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 LRRC39Q96DD0 335 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 CELF6Q96J87 481 aaKnown RBP11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 ATXN3LQ9H3M9 355 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 VPS37BQ9H9H4 285 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 MPP6Q9NZW5 540 aa11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 BCCIPQ9P287 314 aaKnown RBP eCLIP11.68□□□□□ -0.54
CTDSPL-202ENST00000310189 CEP290O15078 2479 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 IGLV3-10A0A075B6K4 115 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 ERI2A8K979 691 aaKnown RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 H3BNC9 293 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 MATN3O15232 486 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 ALOX15BO15296 676 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 RAMP2O60895 175 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 RNF40O75150 1001 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 SPAG6O75602 509 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 ACSL3O95573 720 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 OAS1P00973 400 aaKnown RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 F11P03951 625 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 CKMP06732 381 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 HNRNPA1P09651 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 MYL4P12829 197 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 TSHRP16473 764 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 PTPN2P17706 415 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 OR1E1P30953 314 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 CORO1AP31146 461 aaKnown RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 SEMA5AQ13591 1074 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 UAP1Q16222 522 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 KYNUQ16719 465 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 PARP15Q460N3 678 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 TEX44Q53QW1 395 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 FBXL22Q6P050 247 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 C14orf80Q86SX3 495 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 DENND1CQ8IV53 801 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 UMODL1-AS1Q8N2C9 162 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 MCUQ8NE86 351 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 PPP2R3CQ969Q6 453 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 CORO1BQ9BR76 489 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 PPCSQ9HAB8 311 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 SP110Q9HB58 689 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 EIF2B3Q9NR50 452 aaKnown RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 IGSF9Q9P2J2 1179 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 AAR2Q9Y312 384 aaKnown RBP11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 SH3BP1Q9Y3L3 701 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 PLXNA4Q9HCM2 1894 aa11.67□□□□□ -0.54
CTDSPL-202ENST00000310189 KCNK1O00180 336 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 RASGRF2O14827 1237 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 GRM6O15303 877 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 POLR3GO15318 223 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 RGS16O15492 202 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 CLDN11O75508 207 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ANXA9O76027 345 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 STC2O76061 302 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 JCHAINP01591 159 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ABHD2P08910 425 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 MLNP12872 115 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 CCNB1P14635 433 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 VAV1P15498 845 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 PTPN3P26045 913 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 HOXA9P31269 272 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ETFBP38117 255 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 MAGEA6P43360 314 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 RENBPP51606 427 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 KCNQ1P51787 676 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 CLCN4P51793 760 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 CDH4P55283 916 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ADGRF1Q5T601 910 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 TFAP2DQ7Z6R9 452 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ZNF567Q8N184 647 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 NPWQ8N729 165 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 SH3GL2Q99962 352 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 KLF16Q9BXK1 252 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 SLC39A8Q9C0K1 460 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 LMAN2LQ9H0V9 348 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 MAN1C1Q9NR34 630 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 NINJ2Q9NZG7 142 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 VPS18Q9P253 973 aa11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 IPO11Q9UI26 975 aaKnown RBP11.66□□□□□ -0.54
CTDSPL-202ENST00000310189 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL-202ENST00000310189 TLDC2A0PJX2 215 aa11.65□□□□□ -0.54
CTDSPL-202ENST00000310189 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
CTDSPL-202ENST00000310189 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms