RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 STN1Q9H668 368 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 LRRC40Q9H9A6 602 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 DDX43Q9NXZ2 648 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 COPG2Q9UBF2 871 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 VANGL2Q9ULK5 521 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 SUFUQ9UMX1 484 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 RAD54BQ9Y620 910 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 F8W8V4 182 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 ALOX15P16050 662 aaPredicted RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 PAX7P23759 505 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 HCAR3P49019 387 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 HARS2P49590 506 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 AIF1P55008 147 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 ABCE1P61221 599 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 BEX3Q00994 111 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 ZBTB17Q13105 803 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 FRG1Q14331 258 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 TWF2Q6IBS0 349 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 KCNK16Q96T55 309 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 AGAP2Q99490 1192 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 PARK7Q99497 189 aaKnown RBP15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 THTPAQ9BU02 230 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 GBA3Q9H227 469 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 DNAJC28Q9NX36 388 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 SORCS3Q9UPU3 1222 aa15.57■□□□□ 0.08
SPIRE1-201ENST00000309836 MYBPHLA2RUH7 354 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 HHLA1C9JL84 531 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 USP17L7P0C7H9 530 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 RALBP11234 206 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 GRK2P25098 689 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 ABCG1P45844 678 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 SERPINB8P50452 374 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 LIMK2P53671 638 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 ANKRD20A4Q4UJ75 823 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 RAB41Q5JT25 222 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 MORN1Q5T089 497 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 CERCAMQ5T4B2 595 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 STRA8Q7Z7C7 330 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 TMEM135Q86UB9 458 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 MYLK4Q86YV6 388 aaPredicted RBP15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 MICAL1Q8TDZ2 1067 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 SCG3Q8WXD2 468 aaKnown RBP15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 FAM136AQ96C01 138 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 ATXN7L3BQ96GX2 97 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 C1orf21Q9H246 121 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 TXNDC16Q9P2K2 825 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 SLC7A8Q9UHI5 535 aa15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 CORO1CQ9ULV4 474 aaPredicted RBP15.56■□□□□ 0.08
SPIRE1-201ENST00000309836 C17orf102A2RUQ5 167 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 SIN3BO75182 1162 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 CIB2O75838 187 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 USP1O94782 785 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 PDHA1P08559 390 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 CPA3P15088 417 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 NFKB1P19838 968 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 MXRA7P84157 204 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 GALNT2Q10471 571 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 ITGA9Q13797 1035 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 TRMT5Q32P41 509 aaKnown RBP15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 CLEC14AQ86T13 490 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 LMNTD2Q8IXW0 634 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 KBTBD2Q8IY47 623 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 POU5F2Q8N7G0 328 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 GSTCDQ8NEC7 633 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 OXCT2Q9BYC2 517 aaPredicted RBP15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 CNGB3Q9NQW8 809 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 DDIT4Q9NX09 232 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 BFARQ9NZS9 450 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 ZNF212Q9UDV6 495 aa15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 TIMM13Q9Y5L4 95 aaPredicted RBP15.55■□□□□ 0.08
SPIRE1-201ENST00000309836 A0A088AWK7 358 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 SKAP2O75563 359 aaPredicted RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 LTFP02788 710 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 NCAM1P13591 858 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 MX2P20592 715 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 SPRP35270 261 aaPredicted RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 AFF1P51825 1210 aaKnown RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 ACTR3P61158 418 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 IRF9Q00978 393 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 DLG2Q15700 870 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 VWA5B1Q5TIE3 1220 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 FSTL4Q6MZW2 842 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 ACVR1CQ8NER5 493 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 PPP4R1Q8TF05 950 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 HDAC11Q96DB2 347 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 PCED1BQ96HM7 432 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 APOL2Q9BQE5 337 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 MCMBPQ9BTE3 642 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 TSPYL2Q9H2G4 693 aaPredicted RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 CAB39LQ9H9S4 337 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 APOBEC2Q9Y235 224 aaKnown RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 COL4A4P53420 1690 aaPredicted RBP15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 G3V2L1 256 aa15.54■□□□□ 0.08
SPIRE1-201ENST00000309836 KIF1CO43896 1103 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms