RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 KDM1BQ8NB78 822 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 OR2T34Q8NGX1 318 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 NELFBQ8WX92 580 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 PTPRN2Q92932 1015 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 TIGD1Q96MW7 591 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 INTS2Q9H0H0 1204 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 DKK4Q9UBT3 224 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 HOOK1Q9UJC3 728 aaKnown RBP12.59□□□□□ -0.39
TPT1-201ENST00000309246 FZD4Q9ULV1 537 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 SHROOM3Q8TF72 1996 aa12.59□□□□□ -0.39
TPT1-201ENST00000309246 KNTC1P50748 2209 aa12.58□□□□□ -0.39
TPT1-201ENST00000309246 ARID1BQ8NFD5 2236 aaPredicted RBP12.58□□□□□ -0.39
TPT1-201ENST00000309246 PPP1R3GB7ZBB8 358 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 E5RJQ4 531 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 DFNA5O60443 496 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
TPT1-201ENST00000309246 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
TPT1-201ENST00000309246 HOXB1P14653 301 aaPredicted RBP12.58□□□□□ -0.4
TPT1-201ENST00000309246 VAV1P15498 845 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 BMP6P22004 513 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 CD38P28907 300 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 PPP1R2P41236 205 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 ADPRHP54922 357 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 CLDN6P56747 220 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 STX17P56962 302 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 SHBQ15464 509 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 SMAD1Q15797 465 aaKnown RBP12.58□□□□□ -0.4
TPT1-201ENST00000309246 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPT1-201ENST00000309246 TRIM59Q8IWR1 403 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 PTCD2Q8WV60 388 aaKnown RBP12.58□□□□□ -0.4
TPT1-201ENST00000309246 SKA1Q96BD8 255 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 SLC4A5Q9BY07 1137 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
TPT1-201ENST00000309246 DMXL2Q8TDJ6 3036 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 A0A1W2PR77 199 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 BICDL2A1A5D9 508 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 F5H5T6 163 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 PLK4O00444 970 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 BIN1O00499 593 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 ENC1O14682 589 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 THAP12O43422 761 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 ADH1BP00325 375 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 IL1BP01584 269 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 IGLV3-25P01717 112 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 ITGAVP06756 1048 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 PDGFRAP16234 1089 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 GOT1P17174 413 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 ABCB4P21439 1286 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 C5AR1P21730 350 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 MZF1P28698 734 aaPredicted RBP12.57□□□□□ -0.4
TPT1-201ENST00000309246 CCR5P51681 352 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 METAP1P53582 386 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 PPP2CBP62714 309 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 PPP2CAP67775 309 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 NUCB2P80303 420 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 DNAJC3Q13217 504 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 TAF5Q15542 800 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
TPT1-201ENST00000309246 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 CCAR2Q8N163 923 aaKnown RBP12.57□□□□□ -0.4
TPT1-201ENST00000309246 ATP6V0D2Q8N8Y2 350 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 LRIG1Q96JA1 1093 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 SERAC1Q96JX3 654 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 CNDP2Q96KP4 475 aaKnown RBP12.57□□□□□ -0.4
TPT1-201ENST00000309246 TRIM62Q9BVG3 475 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 POPDC2Q9HBU9 364 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 GDF3Q9NR23 364 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 CNTN6Q9UQ52 1028 aa12.57□□□□□ -0.4
TPT1-201ENST00000309246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPT1-201ENST00000309246 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3DA0A087WVF3 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3IA0A087WXS9 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3EA0A087X179 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3KA0A087X1G2 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3FA6NER0 549 aaPredicted RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3LB9A6J9 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 MED7O43513 233 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 LDOC1O95751 146 aaPredicted RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 AFPP02771 609 aaKnown RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3HP0C7X1 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 EPHA8P29322 1005 aaPredicted RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 GNA15P30679 374 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 DRD3P35462 400 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 NNMTP40261 264 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 ELAVL3Q14576 367 aaKnown RBP12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3GQ6DHY5 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 TBC1D3CQ6IPX1 549 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
TPT1-201ENST00000309246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms