RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 MRRFQ96E11 262 aaKnown RBP16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 PAK5Q9P286 719 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 PSMC3IPQ9P2W1 217 aaPredicted RBP16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 FETUBQ9UGM5 382 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 BCLAF3A2AJT9 711 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 CCT8L1PA6NM43 557 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 KCNN4O15554 427 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 TSHRP16473 764 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 PTPN2P17706 415 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 MTHFRP42898 656 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 MAGEA11P43364 429 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 VEPH1Q14D04 833 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 DNAJB7Q7Z6W7 309 aaPredicted RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■■ 44.4
TSNARE1-201ENST00000307180 CCT6BQ92526 530 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 SUSD6Q92537 303 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 RTP4Q96DX8 246 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 SMARCD1Q96GM5 515 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 MAGEB18Q96M61 343 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 HNRNPABQ99729 332 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 ADAM33Q9BZ11 813 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 KDM4CQ9H3R0 1056 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.29■□□□□ 0.21e-8■■■■□ 26
TSNARE1-201ENST00000307180 SENP1Q9P0U3 644 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 CAPN7Q9Y6W3 813 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 PTPRDP23468 1912 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 CHADO15335 359 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 PRPF4O43172 522 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■■□ 22.4
TSNARE1-201ENST00000307180 SPAG7O75391 227 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 RHOP08100 348 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 MYL4P12829 197 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 RBL1P28749 1068 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 ATXN1P54253 815 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 ACTN3Q08043 901 aaPredicted RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 KCNJ11Q14654 390 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 DPYSL2Q16555 572 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 PABPC1LQ4VXU2 614 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 LACTB2Q53H82 288 aaPredicted RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 EFHC1Q5JVL4 640 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 NUGGCQ68CJ6 796 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 EGFL6Q8IUX8 553 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 FBF1Q8TES7 1133 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 SGSM3Q96HU1 749 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 ASB2Q96Q27 587 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 SMOQ99835 787 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
TSNARE1-201ENST00000307180 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 SNX3O60493 162 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 ZBED1O96006 694 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 FAM200BP0CF97 657 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC18A1P54219 525 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 IL9RQ01113 521 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 SMAD2Q15796 467 aaKnown RBP16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 DENND1AQ8TEH3 1009 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 DUSP16Q9BY84 665 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 MAGEB5Q9BZ81 275 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 ACTR5Q9H9F9 607 aaPredicted RBP16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 ZNF334Q9HCZ1 680 aaPredicted RBP16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 FGFR1OP2Q9NVK5 253 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 AP4E1Q9UPM8 1137 aa16.28■□□□□ 0.2
TSNARE1-201ENST00000307180 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 A0A1W2PPM1 405 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC38A8A6NNN8 435 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 GJA1P17302 382 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ELK3P41970 407 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 WDR4P57081 412 aaKnown RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC8A3P57103 927 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 CBLBQ13191 982 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 MTM1Q13496 603 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ADGRD1Q6QNK2 874 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 GET4Q7L5D6 327 aaPredicted RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ITIH5Q86UX2 942 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 IGDCC3Q8IVU1 814 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ING5Q8WYH8 240 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 SMC6Q96SB8 1091 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 DMAP1Q9NPF5 467 aaPredicted RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 ASAH2Q9NR71 780 aa16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
TSNARE1-201ENST00000307180 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms