RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 LCA5LO95447 670 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 APBB3O95704 486 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DLDP09622 509 aaKnown RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SP9P0CG40 484 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RHOQP17081 205 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MAN1A1P33908 653 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 GJC1P36383 396 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ETFBP38117 255 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ARL4AP40617 200 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ARHGAP25P42331 645 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IL12RB1P42701 662 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MAPKAPK2P49137 400 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF135P52742 658 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KRT83P78385 493 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TCF15Q12870 199 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MESDQ14696 234 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CRY1Q16526 586 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SMTNL2Q2TAL5 461 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZFYVE27Q5T4F4 411 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MANEALQ5VSG8 457 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DAB2IPQ5VWQ8 1189 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TMEM215Q68D42 235 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF783Q6ZMS7 281 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ADIPOR2Q86V24 386 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SORCS1Q8WY21 1168 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 C2orf49Q9BVC5 232 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TMEM248Q9NWD8 314 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 GPATCH2LQ9NWQ4 482 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ILVBLA1L0T0 632 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ANTXRLA6NF34 631 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FAM72CH0Y354 149 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 H3BRJ5 948 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 K7ESF4 209 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ADAM23O75077 832 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EPHX1P07099 455 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SRPRAP08240 638 aaKnown RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MZF1P28698 734 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HOXC13P31276 330 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MRE11P49959 708 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ECT2LQ008S8 904 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KRT81Q14533 505 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FAM72AQ5TYM5 149 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HEATR6Q6AI08 1181 aaKnown RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FAM72DQ6L9T8 149 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FAM72BQ86X60 149 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MAML2Q8IZL2 1156 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DCAF4L2Q8NA75 395 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ACOX2Q99424 681 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 GABRG3Q99928 467 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZSCAN32Q9NX65 697 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 INTS6Q9UL03 887 aaKnown RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PCDHGA2Q9Y5H1 932 aa11.29□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 AXIN1O15169 862 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SPOPO43791 374 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RAMP2O60895 175 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MTA2O94776 668 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KRT7P08729 469 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PRKCHP24723 683 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 IL1R2P27930 398 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FNTBP49356 437 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NUMBP49757 651 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 VAV2P52735 878 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PLK1P53350 603 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SLC25A11Q02978 314 aaKnown RBP11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 GNA12Q03113 381 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RFX8Q6ZV50 586 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms