RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GLUD2P49448 558 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 HK2P52789 917 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 CDC42EP1Q00587 391 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 TIAL1Q01085 375 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS50-202ENST00000305866 GSTM4Q03013 218 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PTPN11Q06124 597 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 PPIL2Q13356 520 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 FASTKD1Q53R41 847 aaKnown RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 BOLA3Q53S33 107 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SH2D4BQ5SQS7 431 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MARCH8Q5T0T0 291 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ATF7IP2Q5U623 682 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PACS1Q6VY07 963 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SLC26A9Q7LBE3 791 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 LYSMD3Q7Z3D4 306 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 TMEM135Q86UB9 458 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PQLC1Q8N2U9 271 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ZNF781Q8N8C0 355 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 FNDC8Q8TC99 324 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 TMEM143Q96AN5 459 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 ADAMTS10Q9H324 1103 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SMARCAD1Q9H4L7 1026 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 CLIC5Q9NZA1 410 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 C6orf203Q9P0P8 240 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 USP18Q9UMW8 372 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MAD1L1Q9Y6D9 718 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 NUP205Q92621 2012 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 HNRNPRO43390 633 aaKnown RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 PDE5AO76074 875 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 LTFP02788 710 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 CD247P20963 164 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 CCR10P46092 362 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ALDH1A3P47895 512 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SLC1A6P48664 564 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ZNF135P52742 658 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 LIMK1P53667 647 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 KLF10Q13118 480 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 HERC3Q15034 1050 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 HADHQ16836 314 aaKnown RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 SLC10A6Q3KNW5 377 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ANKDD1AQ495B1 522 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PPM1JQ5JR12 505 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 PHYKPLQ8IUZ5 450 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 POU5F2Q8N7G0 328 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 JADE3Q92613 823 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 SLC29A1Q99808 456 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 C16orf70Q9BSU1 422 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 ANKRD60Q9BZ19 345 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MTMR12Q9C0I1 747 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MINDY3Q9H8M7 445 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 MORF4L1Q9UBU8 362 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 LZTS1Q9Y250 596 aa5.58□□□□□ -1.52
VPS50-202ENST00000305866 NUP210Q8TEM1 1887 aaPredicted RBP5.58□□□□□ -1.52
VPS50-202ENST00000305866 IQANK1A0A1B0GTG1 560 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SGK1O00141 431 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PIRO00625 290 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SERPINB7O75635 380 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SULT1C4O75897 302 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CYP2C8P10632 490 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 KRT3P12035 628 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 COX4I1P13073 169 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 KCNE1P15382 129 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TNNI1P19237 187 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CD68P34810 354 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 POLR2IP36954 125 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 RGS2P41220 211 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 RPL5P46777 297 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 AP2B1P63010 937 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TFDP2Q14188 446 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PAFAH1B3Q15102 231 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 TGFBIQ15582 683 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 MTERF2Q49AM1 385 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 INTS6LQ5JSJ4 861 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 FYB2Q5VWT5 728 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 C16orf46Q6P387 395 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 STRADAQ7RTN6 431 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TTC30AQ86WT1 665 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SPNS2Q8IVW8 549 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CENPLQ8N0S6 344 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 RNF169Q8NCN4 708 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 GSDMBQ8TAX9 411 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SLC2A13Q96QE2 648 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SLC9A7Q96T83 725 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PAIP2Q9BPZ3 127 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 NEURL2Q9BR09 285 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 GCOM2Q9BZD3 368 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 TRIM4Q9C037 500 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 WWP1Q9H0M0 922 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CDH19Q9H159 772 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 VCXQ9H320 206 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PICK1Q9NRD5 415 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 NDE1Q9NXR1 346 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DMTF1Q9Y222 760 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 OBSL1O75147 1896 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 HELZP42694 1942 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZNF701M0R085 212 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 TPP1O14773 563 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 INPPL1O15357 1258 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ADAM23O75077 832 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms