RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 BORCS5Q969J3 196 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 DAPK2Q9UIK4 370 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 HEMK1Q9Y5R4 338 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 PSMD12O00232 456 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CDH3P22223 829 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 IL23RQ5VWK5 629 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 HERC6Q8IVU3 1022 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 PGAM4Q8N0Y7 254 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CMASQ8NFW8 434 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 TNIP2Q8NFZ5 429 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 TMIGD2Q96BF3 282 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 GPRASP2Q96D09 838 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CERS2Q96G23 380 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CPNE1Q99829 537 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 PCDHAC1Q9H158 963 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 IRS2Q9Y4H2 1338 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 H3BNX3 289 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 KCNK1O00180 336 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 WNT7BP56706 349 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CAND1Q86VP6 1230 aaKnown RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 AMIGO3Q86WK7 504 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 FNIP1Q8TF40 1166 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 WDR83Q9BRX9 315 aaKnown RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CFAP99D6REC4 459 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 ANGPT2O15123 496 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 TIMM44O43615 452 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 H2AFYO75367 372 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 APOA4P06727 396 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 CKMT2P17540 419 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 CDH2P19022 906 aaPredicted RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PCSK6P29122 969 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SLC5A2P31639 672 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 STAT5BP51692 787 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 MYBPC1Q00872 1141 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 FSTL1Q12841 308 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 FASTKQ14296 549 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PCLAFQ15004 111 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 FAM131BQ86XD5 332 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PCYOX1LQ8NBM8 494 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 URGCPQ8TCY9 931 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 NT5C1AQ9BXI3 368 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 ACE2Q9BYF1 805 aaPredicted RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 TSPAN16Q9UKR8 245 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 RAP2CQ9Y3L5 183 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SLCO1B7G3V0H7 640 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 MAFGO15525 162 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 CHRNGP07510 517 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 CXCL8P10145 99 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 VDRP11473 427 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PRDX6P30041 224 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 IL1RL1Q01638 556 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 STXBP2Q15833 593 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 LGMNQ99538 433 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 GATA5Q9BWX5 397 aaPredicted RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 RNF103O00237 685 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 GNGT2O14610 69 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 MRASO14807 208 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 TPH1P17752 444 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
TRIM35-201ENST00000305364 HSD17B4P51659 736 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 RGS21Q2M5E4 152 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 ATF7IP2Q5U623 682 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SLC9A4Q6AI14 798 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 GK5Q6ZS86 529 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 FAM151AQ8WW52 585 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 EPB41L1Q9H4G0 881 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 PCDH18Q9HCL0 1135 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SYBUQ9NX95 663 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 COL4A1P02462 1669 aa13.29□□□□□ -0.28
TRIM35-201ENST00000305364 FAM159BA6NKW6 160 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 UBDO15205 165 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ZBTB14O43829 449 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 DLG2Q15700 870 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 HABP4Q5JVS0 413 aaKnown RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 KDELC2Q7Z4H8 507 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 LPGAT1Q92604 370 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 CXorf21Q9HAI6 301 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 CROTQ9UKG9 612 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms