RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 USP2O75604 605 aaPredicted RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 TPSB2P20231 275 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ARL4AP40617 200 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 RANBP1P43487 201 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ALDH1A3P47895 512 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SYPL2Q5VXT5 272 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 HFE2Q6ZVN8 426 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 FBXW8Q8N3Y1 598 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 RCN3Q96D15 328 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 CENPKQ9BS16 269 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SEMA6AQ9H2E6 1030 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SUDS3Q9H7L9 328 aaPredicted RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 GPAMQ9HCL2 828 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 MDM4O15151 490 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 CCNT2O60583 730 aaKnown RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 BEST1O76090 585 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 TGFB3P10600 412 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 HDCP19113 662 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 MS4A2Q01362 244 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 PDK1Q15118 436 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 DPYSL2Q16555 572 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 PGM2L1Q6PCE3 622 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SPATA24Q86W54 205 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 ACTRT2Q8TDY3 377 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SCYL1Q96KG9 808 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 C1orf21Q9H246 121 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 CYP3A43Q9HB55 503 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 IARS2Q9NSE4 1012 aaKnown RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 A0A0G2JMZ2 1700 aa13.85□□□□□ -0.19
CTTN-201ENST00000301843 POLR2AP24928 1970 aaKnown RBP13.85□□□□□ -0.19
CTTN-201ENST00000301843 INCA1Q0VD86 236 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 IFRD2Q12894 506 aaPredicted RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 CMTM5Q96DZ9 223 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 MPP4Q96JB8 637 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 NPAS2Q99743 824 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 CDHR5Q9HBB8 845 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 DCDC2Q9UHG0 476 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 SLC4A7Q9Y6M7 1214 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 SHROOM3Q8TF72 1996 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 CSPG5O95196 566 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 TKTP29401 623 aaKnown RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 MAGEA6P43360 314 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 NAGLUP54802 743 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 NRF1Q16656 503 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 RBM44Q6ZP01 1051 aaKnown RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 TASP1Q9H6P5 420 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 TCF7L2Q9NQB0 619 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 MKS1Q9NXB0 559 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 ARHGAP26Q9UNA1 814 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 SPTLC1O15269 473 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 C2P06681 752 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 PGAM1P18669 254 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 DPP6P42658 865 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 NAT14Q8WUY8 206 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
CTTN-201ENST00000301843 ITGA11Q9UKX5 1188 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
CTTN-201ENST00000301843 M0QYT0 321 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 TSPAN1O60635 241 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 LSM12Q3MHD2 195 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 PKDCCQ504Y2 493 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 RNF139Q8WU17 664 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 AFG1LQ8WV93 481 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 PRPF18Q99633 342 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 FRMD8Q9BZ67 464 aaPredicted RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 CDH19Q9H159 772 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 NXF3Q9H4D5 531 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 C20orf96Q9NUD7 363 aaPredicted RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 GPRC5DQ9NZD1 345 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 G3V2L1 256 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 PIGNO95427 931 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 POLBP06746 335 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 MX2P20592 715 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 RPL10P27635 214 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 PIK3R1P27986 724 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 GP5P40197 560 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 FLOT2Q14254 428 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 TBCCQ15814 346 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 CNGA3Q16281 694 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 LRRC8BQ6P9F7 803 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 LILRA2Q8N149 483 aa13.83□□□□□ -0.2
CTTN-201ENST00000301843 PCDH20Q8N6Y1 951 aaKnown RBP13.83□□□□□ -0.2
CTTN-201ENST00000301843 BHLHE22Q8NFJ8 381 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms