RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 STILQ15468 1287 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CA9Q16790 459 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 ZNF362Q5T0B9 420 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 TMEM214Q6NUQ4 689 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 UTS2BQ765I0 119 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 SETD3Q86TU7 594 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 NIPA2Q8N8Q9 360 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 RXFP2Q8WXD0 754 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PIWIL1Q96J94 861 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 RNF157Q96PX1 679 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 MPHOSPH6Q99547 160 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 AURKCQ9UQB9 309 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 APOL1O14791 398 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 MT-CO1P00395 513 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 NR4A1P22736 598 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PPARGP37231 505 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 RGS7P49802 495 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GBE1Q04446 702 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 DMPKQ09013 629 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 NR1D2Q14995 579 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GK5Q6ZS86 529 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GPR180Q86V85 440 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 CYGBQ8WWM9 190 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 GATA5Q9BWX5 397 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 FRMD8P1Q9BZ68 369 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 INO80BQ9C086 356 aaPredicted RBP11.22□□□□□ -0.61
SNX20-201ENST00000300590 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 FAM96AQ9H5X1 160 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 EFCAB1Q9HAE3 211 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PNPLA3Q9NST1 481 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
SNX20-201ENST00000300590 PCNTO95613 3336 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 ZNF839A8K0R7 811 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 KCNU1A8MYU2 1149 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 PIGNO95427 931 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 LSM8O95777 96 aaKnown RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 PRKCGP05129 697 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 NAGLUP54802 743 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 CSE1LP55060 971 aaKnown RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 ZNF699Q32M78 642 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 AARS2Q5JTZ9 985 aaKnown RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 IL31Q6EBC2 164 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 CCNYL1Q8N7R7 359 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 BIRC8Q96P09 236 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 CGRRF1Q99675 332 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 NEURL2Q9BR09 285 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 ILKAPQ9H0C8 392 aaPredicted RBP11.21□□□□□ -0.61
SNX20-201ENST00000300590 POLR1BQ9H9Y6 1135 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 ASNSD1Q9NWL6 643 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 MKS1Q9NXB0 559 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 PCDHA10Q9Y5I2 948 aa11.21□□□□□ -0.61
SNX20-201ENST00000300590 M0QYV0 167 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 MAFGO15525 162 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 USP12O75317 370 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 BCAS2O75934 225 aaPredicted RBP11.21□□□□□ -0.62
SNX20-201ENST00000300590 KCNH1O95259 989 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 CLCN2P51788 898 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 YWHAEP62258 255 aaKnown RBP11.21□□□□□ -0.62
SNX20-201ENST00000300590 PERM1Q5SV97 790 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 LRRC8EQ6NSJ5 796 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 ZNF534Q76KX8 674 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 XYLT1Q86Y38 959 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 DCLK2Q8N568 766 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 LPGAT1Q92604 370 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 BORCS5Q969J3 196 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 SCYL1Q96KG9 808 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 OSBPL11Q9BXB4 747 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 SNX15Q9NRS6 342 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 PCDHB12Q9Y5F1 795 aa11.21□□□□□ -0.62
SNX20-201ENST00000300590 RNF103-CHMP3A0A140T963 221 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 TMEM233B4DJY2 109 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 HTRA2O43464 458 aaPredicted RBP11.2□□□□□ -0.62
SNX20-201ENST00000300590 ASS1P00966 412 aaKnown RBP11.2□□□□□ -0.62
SNX20-201ENST00000300590 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
SNX20-201ENST00000300590 BMXP51813 675 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 FAM219BQ5XKK7 198 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 SEL1L3Q68CR1 1132 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 PCDH19Q8TAB3 1148 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 SOX17Q9H6I2 414 aaPredicted RBP11.2□□□□□ -0.62
SNX20-201ENST00000300590 IL1RL2Q9HB29 575 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 CORINQ9Y5Q5 1042 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 E7ENX8 843 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 EDN1P05305 212 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 PRDX6P30041 224 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 ZNF132P52740 706 aa11.2□□□□□ -0.62
SNX20-201ENST00000300590 PMS2P3Q13401 168 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms