RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GM2AP17900 193 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CHRM3P20309 590 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ADORA2AP29274 412 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ASPAP45381 313 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ACADSBP45954 432 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CCL15Q16663 113 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 PPM1LQ5SGD2 360 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 CELF3Q5SZQ8 465 aaKnown RBP13.57□□□□□ -0.24
CASC4-201ENST00000299957 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
CASC4-201ENST00000299957 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
CASC4-201ENST00000299957 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 MAGEC3Q8TD91 643 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 PBXIP1Q96AQ6 731 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 ASB7Q9H672 318 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 STX18Q9P2W9 335 aaKnown RBP13.57□□□□□ -0.24
CASC4-201ENST00000299957 MYH1P12882 1939 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
CASC4-201ENST00000299957 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 UBDO15205 165 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TIMM44O43615 452 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MSCO60682 206 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MT-CYBP00156 380 aaPredicted RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 CD4P01730 458 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MAP4P27816 1152 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 GSSP48637 474 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 FOLH1Q04609 750 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 UGP2Q16851 508 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 RBM44Q6ZP01 1051 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 OR52K2Q8NGK3 314 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 UTP4Q969X6 686 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 B3GALT6Q96L58 329 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 RPRD1AQ96P16 312 aaPredicted RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 HBEGFQ99075 208 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 EIF2AQ9BY44 585 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 FAM149AA5PLN7 773 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 HOXC6P09630 235 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TGFB3P10600 412 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ME2P23368 584 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 IRF9Q00978 393 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ZNF252P-AS1Q0IIN9 211 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TWF1Q12792 350 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ACVR2BQ13705 512 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 DPY19L2P1Q6NXN4 242 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 FRMD8P1Q9BZ68 369 aaPredicted RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 SLIT2O94813 1529 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 SYCE1LA8MT33 242 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TRDMT1O14717 391 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 DDHD2O94830 711 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 IRF1P10914 325 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ZIK1Q3SY52 487 aaPredicted RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 SV2CQ496J9 727 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
CASC4-201ENST00000299957 ULK4Q96C45 1275 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ALG9Q9H6U8 611 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MPP6Q9NZW5 540 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TNFSF13BQ9Y275 285 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 A8MX80 341 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TM7SF2O76062 418 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 SERPINA6P08185 405 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 GRIA3P42263 894 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 GPD2P43304 727 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 TUBP50607 506 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 EFEMP1Q12805 493 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 GK5Q6ZS86 529 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MYO1HQ8N1T3 1032 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 BBS5Q8N3I7 341 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 ITGA11Q9UKX5 1188 aa13.56□□□□□ -0.24
CASC4-201ENST00000299957 MYH14Q7Z406 1995 aaKnown RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 TYROBPO43914 113 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 LTFP02788 710 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 NOVP48745 357 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 FASTKQ14296 549 aaKnown RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 CYLDQ9NQC7 956 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 KIAA1257Q9ULG3 409 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 C2CD4BA6NLJ0 364 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 ZBTB24O43167 697 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms