RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MCUQ8NE86 351 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 HTR3CQ8WXA8 447 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 MAGEB5Q9BZ81 275 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 CNTN6Q9UQ52 1028 aa11.65□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF839A8K0R7 811 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TK2O00142 265 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PLSCR1O15162 318 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TIPRLO75663 272 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PSMB4P28070 264 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PHKA2P46019 1235 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 GRIA4P48058 902 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 C21orf59P57076 290 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 NEDD8Q15843 81 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 ARL13AQ5H913 290 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 GK5Q6ZS86 529 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 DLG3Q92796 817 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 CERS2Q96G23 380 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 OSBPL6Q9BZF3 934 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 GGA3Q9NZ52 723 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 LCP1P13796 627 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TPH1P17752 444 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TFEBP19484 476 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 MAP4P27816 1152 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 ARRB2P32121 409 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 ASPAP45381 313 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 GOLGA7BQ2TAP0 167 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 AGKQ53H12 422 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 EPGNQ6UW88 154 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 XKR5Q6UX68 686 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 NAPRTQ6XQN6 538 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 IFNEQ86WN2 208 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 FAM131BQ86XD5 332 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 SMYD1Q8NB12 490 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PDZD8Q8NEN9 1154 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 APBA2Q99767 749 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 OMDQ99983 421 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 B3GNT5Q9BYG0 378 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TRPC7Q9HCX4 862 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PLK2Q9NYY3 685 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 BCLAF3A2AJT9 711 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 KCNU1A8MYU2 1149 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 C2P06681 752 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PGAM1P18669 254 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 HMOX2P30519 316 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 NME5P56597 212 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 RPL26P61254 145 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PSME3P61289 254 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 HERC6Q8IVU3 1022 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 OR52K1Q8NGK4 314 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PBXIP1Q96AQ6 731 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 CNDP1Q96KN2 507 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 AGAP2Q99490 1192 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 LHX5Q9H2C1 402 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 IARS2Q9NSE4 1012 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 MID2Q9UJV3 735 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 TRPC5Q9UL62 973 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 AP4E1Q9UPM8 1137 aa11.64□□□□□ -0.55
TRUB1-201ENST00000298746 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
TRUB1-201ENST00000298746 PSMD12O00232 456 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 RNF103O00237 685 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 PAPSS1O43252 624 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 EDN1P05305 212 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 L1CAMP32004 1257 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 NDST1P52848 882 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 SLC12A2P55011 1212 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 TPD52P55327 224 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 MGAT5BQ3V5L5 792 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 URGCPQ8TCY9 931 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 OSBPL11Q9BXB4 747 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ACE2Q9BYF1 805 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ARMC7Q9H6L4 198 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 CYP4F12Q9HCS2 524 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 PNPLA3Q9NST1 481 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 UBP1Q9NZI7 540 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 TBC1D30Q9Y2I9 924 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 TSC22D4Q9Y3Q8 395 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 C2CD4BA6NLJ0 364 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 AP1G1O43747 822 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 GJB1P08034 283 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 CDK9P50750 372 aaKnown RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 STAT5BP51692 787 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ANKDD1AQ495B1 522 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 CCDC92Q53HC0 331 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 METTL21CQ5VZV1 264 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 KLHL32Q96NJ5 620 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 EBF1Q9UH73 591 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 RIMS3Q9UJD0 308 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms