RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 H0YIN7 160 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TRIM38O00635 465 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 AMHP03971 560 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 CD19P15391 556 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 GABRB3P28472 473 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TYK2P29597 1187 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 BCAP31P51572 246 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 FKBP1AP62942 108 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 GRM1Q13255 1194 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TRPC3Q13507 836 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PDK2Q15119 407 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 BCL2A1Q16548 175 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TRNP1Q6NT89 227 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 CDKL3Q8IVW4 592 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 MYO1HQ8N1T3 1032 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 DOLKQ9UPQ8 538 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PLOD2O00469 737 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 NDUFB5O43674 189 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 OCM2P0CE71 109 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 CAP2P40123 477 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 ESRRGP62508 458 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PRKCEQ02156 737 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 KCNC4Q03721 635 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 C16orf87Q6PH81 154 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 SLC2A7Q6PXP3 512 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 FASTKD5Q7L8L6 764 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 TBC1D15Q8TC07 691 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 LRTOMTQ8WZ04 291 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 UHRF1Q96T88 793 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 DOK1Q99704 481 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 SLC29A1Q99808 456 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 PAIP1Q9H074 479 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 DBNDD1Q9H9R9 158 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 ZBTB26Q9HCK0 441 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 SNX15Q9NRS6 342 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 FADS3Q9Y5Q0 445 aa13.79□□□□□ -0.2
RPUSD4-201ENST00000298317 A0A087WXM4 84 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 C9IYK1 514 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 K7ERI5 159 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 NEMP1O14524 444 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 HDAC3O15379 428 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 HTRA2O43464 458 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PRPSAP2O60256 369 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 H2AFYO75367 372 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 ATE1O95260 518 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 FUCA1P04066 466 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 MLNP12872 115 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 GPD1P21695 349 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PSMD8P48556 350 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 ART3Q13508 389 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 EMC2Q15006 297 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 NHSL2Q5HYW2 709 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 DACT2Q5SW24 774 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 LYSMD3Q7Z3D4 306 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PLD6Q8N2A8 252 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 CNTD1Q8N815 330 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 FAM156AQ8NDB6 213 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PLEKHA8Q96JA3 519 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 NEURL2Q9BR09 285 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 EFCAB1Q9HAE3 211 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 DUS2Q9NX74 493 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 PTBP2Q9UKA9 531 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 CDC14AQ9UNH5 594 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 C2CD4BA6NLJ0 364 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TMX2-CTNND1H3BSU7 103 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 CSPG5O95196 566 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 MPSTP25325 297 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 TNFSF9P41273 254 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 NAMPTP43490 491 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 HK2P52789 917 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 C15orf59Q2T9L4 293 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 SWSAP1Q6NVH7 229 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
RPUSD4-201ENST00000298317 CENPSQ8N2Z9 138 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms