RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PLD4Q96BZ4 506 aa23.42■■□□□ 1.34
PTX3-201ENST00000295927 ROPN1BQ9BZX4 212 aaPredicted RBP23.42■■□□□ 1.34
PTX3-201ENST00000295927 NOL6Q9H6R4 1146 aaKnown RBP23.42■■□□□ 1.34
PTX3-201ENST00000295927 ROPN1Q9HAT0 212 aaPredicted RBP23.42■■□□□ 1.34
PTX3-201ENST00000295927 GKN1Q9NS71 199 aa23.42■■□□□ 1.34
PTX3-201ENST00000295927 MTCL1Q9Y4B5 1905 aaKnown RBP23.42■■□□□ 1.34
PTX3-201ENST00000295927 RASGRF2O14827 1237 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 LRG1P02750 347 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 MYOGP15173 224 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 TEX44Q53QW1 395 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 CCDC149Q6ZUS6 474 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 CROCCP2Q86T23 111 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 UMODL1-AS1Q8N2C9 162 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 ZSCAN18Q8TBC5 510 aaPredicted RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 MYEOVQ96EZ4 313 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 PKNOX2Q96KN3 472 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 RPRD1AQ96P16 312 aaPredicted RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 TRHDEQ9UKU6 1024 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 DENND4CQ5VZ89 1909 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 CLUHO75153 1309 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 A0A087WUV0 522 aaPredicted RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 ZBTB24O43167 697 aaPredicted RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 MAFKO60675 156 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 STC2O76061 302 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 ARHGEF15O94989 841 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 C8AP07357 584 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 SLCO1A2P46721 670 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 LMAN1P49257 510 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 PAPOLAP51003 745 aaKnown RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 LONRF1Q17RB8 773 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 C6orf118Q5T5N4 469 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 CAPN12Q6ZSI9 719 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 FAM76AQ8TAV0 307 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 AGAP3Q96P47 875 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 VAT1Q99536 393 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 KLF16Q9BXK1 252 aaPredicted RBP23.41■■□□□ 1.34
PTX3-201ENST00000295927 VPS37BQ9H9H4 285 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 TLR9Q9NR96 1032 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 DONSONQ9NYP3 566 aa23.41■■□□□ 1.34
PTX3-201ENST00000295927 JCHAINP01591 159 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 ELK3P41970 407 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 SLC11A2P49281 568 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 NDST2P52849 883 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 GPX6P59796 221 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 SKIDA1Q1XH10 827 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 PABPC1LQ4VXU2 614 aaKnown RBP23.4■■□□□ 1.34
PTX3-201ENST00000295927 FAM133BQ5BKY9 247 aaKnown RBP23.4■■□□□ 1.34
PTX3-201ENST00000295927 ZNF534Q76KX8 674 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 DENND1CQ8IV53 801 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 IGDCC3Q8IVU1 814 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 PDCD7Q8N8D1 485 aaKnown RBP23.4■■□□□ 1.34
PTX3-201ENST00000295927 EIF2B3Q9NR50 452 aaKnown RBP23.4■■□□□ 1.34
PTX3-201ENST00000295927 ADAM21Q9UKJ8 722 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 CHMP2BQ9UQN3 213 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 TEX264Q9Y6I9 313 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 GBF1Q92538 1859 aa23.4■■□□□ 1.34
PTX3-201ENST00000295927 F5H5T6 163 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 GLUD1P00367 558 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 KLKB1P03952 638 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 SLC6A4P31645 630 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 CD68P34810 354 aaPredicted RBP23.39■■□□□ 1.34
PTX3-201ENST00000295927 CDK16Q00536 496 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 STAT4Q14765 748 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 CCDC38Q502W7 563 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 CIR1Q86X95 450 aaPredicted RBP23.39■■□□□ 1.34
PTX3-201ENST00000295927 LGI2Q8N0V4 545 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 AGGF1Q8N302 714 aaeCLIP23.39■■□□□ 1.34
PTX3-201ENST00000295927 ATP11CQ8NB49 1132 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 PGM2Q96G03 612 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 TEKT5Q96M29 485 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 TRPC7Q9HCX4 862 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 ZNF212Q9UDV6 495 aa23.39■■□□□ 1.34
PTX3-201ENST00000295927 NOVA2Q9UNW9 492 aaKnown RBP23.39■■□□□ 1.34
PTX3-201ENST00000295927 GRXCR1A8MXD5 290 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 TCEA3O75764 348 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 IRF1P10914 325 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 CORO1AP31146 461 aaKnown RBP23.39■■□□□ 1.33
PTX3-201ENST00000295927 GRIA1P42261 906 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 UBE3AQ05086 875 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 C9orf50Q5SZB4 431 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 RFWD3Q6PCD5 774 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 LRRC49Q8IUZ0 686 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 HS6ST3Q8IZP7 471 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 AZIN2Q96A70 460 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 CYP2S1Q96SQ9 504 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 CCDC77Q9BR77 488 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 GBA3Q9H227 469 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 RSPH14Q9UHP6 348 aa23.39■■□□□ 1.33
PTX3-201ENST00000295927 C5orf67F2Z3F1 127 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 MATN3O15232 486 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 MBL2P11226 248 aaPredicted RBP23.38■■□□□ 1.33
PTX3-201ENST00000295927 CCNB1P14635 433 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 GABRR2P28476 465 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 SSTR1P30872 391 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 MAGEA3P43357 314 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 C5orf22Q49AR2 442 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 TMC8Q8IU68 726 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 PALM2Q8IXS6 379 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 USP33Q8TEY7 942 aa23.38■■□□□ 1.33
PTX3-201ENST00000295927 WBP2Q969T9 261 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms