RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 RASIP1Q5U651 963 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ZNF534Q76KX8 674 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ZNF567Q8N184 647 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
PDPN-201ENST00000294489 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 NETO2Q8NC67 525 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 GSDMBQ8TAX9 411 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ZSCAN18Q8TBC5 510 aaPredicted RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 MYRFLQ96LU7 910 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ELAC2Q9BQ52 826 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 IGSF9Q9P2J2 1179 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 KCNK1O00180 336 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ASMTLO95671 621 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SLC2A3P11169 496 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PRKCHP24723 683 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 TUFMP49411 452 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 RING1Q06587 406 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 RAB33AQ14088 237 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 TRIP4Q15650 581 aaPredicted RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 C6orf89Q6UWU4 347 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 NPWQ8N729 165 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PPM1NQ8N819 430 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 VAT1Q99536 393 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 TLR8Q9NR97 1041 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 SPG21Q9NZD8 308 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SFMBT1Q9UHJ3 866 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 TTLL3Q9Y4R7 772 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 SDR42E2A6NKP2 422 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 FGF10O15520 208 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 TYROBPO43914 113 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 PAGE1O75459 146 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 KRT37O76014 449 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 SRGAP2BP0DMP2 458 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 RAG1P15918 1043 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 PSMB4P28070 264 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 RPA3P35244 121 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 COG7P83436 770 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 DUSP4Q13115 394 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 MTA1Q13330 715 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 ITIH4Q14624 930 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 TTC39BQ5VTQ0 682 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 HHATQ5VTY9 493 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 RWDD4Q6NW29 188 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 CASC4Q6P4E1 433 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 UNC5AQ6ZN44 842 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 ZNF461Q8TAF7 563 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 DENND1AQ8TEH3 1009 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 STAMBPL1Q96FJ0 436 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 TRMT2BQ96GJ1 504 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 NAT9Q9BTE0 207 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 SIK2Q9H0K1 926 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 RXFP1Q9HBX9 757 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 FGFR1OP2Q9NVK5 253 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 PPARGC1AQ9UBK2 798 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 ZNF180Q9UJW8 692 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 TRHDEQ9UKU6 1024 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 PCDHA11Q9Y5I1 949 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 SOAT2O75908 522 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 SEC24AO95486 1093 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 PTPN3P26045 913 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 GARSP41250 739 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 GRIA1P42261 906 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 TAF10Q12962 218 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 KLHDC10Q6PID8 442 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 STKLD1Q8NE28 680 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 MZB1Q8WU39 189 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 FATE1Q969F0 183 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 FBXO32Q969P5 355 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 TSGA13Q96PP4 275 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 CDK5RAP1Q96SZ6 601 aaKnown RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
PDPN-201ENST00000294489 SNX10Q9Y5X0 201 aa9.37□□□□□ -0.91
PDPN-201ENST00000294489 TM9SF1O15321 606 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 MSI1O43347 362 aaKnown RBP9.36□□□□□ -0.91
PDPN-201ENST00000294489 SNX3O60493 162 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 HMGA1P17096 107 aaKnown RBP9.36□□□□□ -0.91
PDPN-201ENST00000294489 OR1D2P34982 312 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 MGAT5BQ3V5L5 792 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 C5orf22Q49AR2 442 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 CYS1Q717R9 158 aa9.36□□□□□ -0.91
PDPN-201ENST00000294489 PRPF39Q86UA1 669 aaKnown RBP9.36□□□□□ -0.91
PDPN-201ENST00000294489 TP53INP2Q8IXH6 220 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms