RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 VAPBO95292 243 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 CNPP09543 421 aaKnown RBP16.41■□□□□ 0.22
SSRP1-202ENST00000293880 GJA8P48165 433 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 MADCAM1Q13477 382 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 POM121L1PQ3SYA9 428 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 DSG4Q86SJ6 1040 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 TMEM132CQ8N3T6 1108 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 HGH1Q9BTY7 390 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 TOR3AQ9H497 397 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 A0A096LPK6 155 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 PGM3O95394 542 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 RARAP10276 462 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 ADRA1DP25100 572 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 PSMA8Q8TAA3 256 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
SSRP1-202ENST00000293880 EFR3BQ9Y2G0 817 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
SSRP1-202ENST00000293880 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 OSCP1Q8WVF1 389 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 NDOR1Q9UHB4 597 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 OGDHLQ9ULD0 1010 aa16.41■□□□□ 0.22
SSRP1-202ENST00000293880 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 OGTO15294 1046 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CKMP06732 381 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 VCLP18206 1134 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 HERC6Q8IVU3 1022 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 IPCEF1Q8WWN9 437 aaPredicted RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 FAM129BQ96TA1 746 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 POLR1DQ9Y2S0 133 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 KHDRBS3O75525 346 aaKnown RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 FNBP1LQ5T0N5 605 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SPACA7Q96KW9 195 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 C8orf4Q9NR00 106 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 LNPEPQ9UIQ6 1025 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SIK3Q9Y2K2 1263 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 PMF1-BGLAPU3KQ54 211 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 A0A087WZ62 844 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SSNA1O43805 119 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 PDE9AO76083 593 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 HMGCRP04035 888 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 ICAM1P05362 532 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CYP4B1P13584 511 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CYP2A7P20853 494 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 PAICSP22234 425 aaKnown RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 NAMPTP43490 491 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 NDST1P52848 882 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 DEFB128Q7Z7B8 93 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 POC5Q8NA72 575 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 STK32AQ8WU08 396 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 FRMD8Q9BZ67 464 aaPredicted RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 AGO4Q9HCK5 861 aaKnown RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 THAP1Q9NVV9 213 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 ADPRHL2Q9NX46 363 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 EME2A4GXA9 379 aaPredicted RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SLCO1B7G3V0H7 640 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 PSIP1O75475 530 aaKnown RBP16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CCR1P32246 355 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 TAF13Q15543 124 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SPANXN3Q5MJ09 141 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 SPANXN2Q5MJ10 180 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 KIAA0895Q8NCT3 520 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 ACTL9Q8TC94 416 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 COLEC11Q9BWP8 271 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 BTRCQ9Y297 605 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CYP2C8P10632 490 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 COX7A2P14406 83 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 CDH8P55286 799 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
SSRP1-202ENST00000293880 H7C4K7 107 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 SCAMP3O14828 347 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 TRIM3O75382 744 aaPredicted RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 KCNH1O95259 989 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 POLD2P49005 469 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 ZCCHC8Q6NZY4 707 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 PLA2G12BQ9BX93 195 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 BPIFA1Q9NP55 256 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CEP152O94986 1710 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 GMFGO60234 142 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 TYMPP19971 482 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CASP5P51878 434 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 RALGDSQ12967 914 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 RGS21Q2M5E4 152 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 OSMRQ99650 979 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms