RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ADAM32Q8TC27 787 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 ACTRT2Q8TDY3 377 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 HSFY1Q96LI6 401 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 OSMRQ99650 979 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 RBBP8Q99708 897 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 CPNE1Q99829 537 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 ADAMTS10Q9H324 1103 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 ANLNQ9NQW6 1124 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 KLHL8Q9P2G9 620 aaPredicted RBP17.24■□□□□ 0.35
CHRNE-201ENST00000293780 POMPQ9Y244 141 aa17.24■□□□□ 0.35
CHRNE-201ENST00000293780 G3V2L1 256 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PIRO00625 290 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 AMHP03971 560 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 MX2P20592 715 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 POLE2P56282 527 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 ROR2Q01974 943 aaKnown RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 NAB1Q13506 487 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 OSTM1Q86WC4 334 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PDSS2Q86YH6 399 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 SULF1Q8IWU6 871 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 CMTM5Q96DZ9 223 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 COL1A2P08123 1366 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 GARSP41250 739 aaKnown RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 DEUP1Q05D60 604 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 BTKQ06187 659 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 MSLNQ13421 630 aaPredicted RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 TTLL12Q14166 644 aaPredicted RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 HSP90AA5PQ58FG0 334 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 ZNF410Q86VK4 478 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 MFSD3Q96ES6 412 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PPP1R36Q96LQ0 422 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 APOL2Q9BQE5 337 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 IGSF9Q9P2J2 1179 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PDP2Q9P2J9 529 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 RCOR3Q9P2K3 495 aaPredicted RBP17.23■□□□□ 0.35
CHRNE-201ENST00000293780 PCDHB12Q9Y5F1 795 aa17.23■□□□□ 0.35
CHRNE-201ENST00000293780 GOLGA8TH3BQL2 631 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
CHRNE-201ENST00000293780 HSPA4LO95757 839 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 LTFP02788 710 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 COX4I1P13073 169 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 IGFBP6P24592 240 aaPredicted RBP17.22■□□□□ 0.35
CHRNE-201ENST00000293780 PTPN3P26045 913 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 PEX2P28328 305 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 MAGEA12P43365 314 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 TBL3Q12788 808 aaKnown RBP17.22■□□□□ 0.35
CHRNE-201ENST00000293780 CERCAMQ5T4B2 595 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 EPGNQ6UW88 154 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 ADGRG6Q86SQ4 1221 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 PPP2R3CQ969Q6 453 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GBP5Q96PP8 586 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 OR52B2Q96RD2 323 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 CDH19Q9H159 772 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 A0A096LPK6 155 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GOLGA8QA0A0J9YX86 632 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 SMIM28A0A1B0GU29 152 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 ZCWPW2A0A1B0GU75 182 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GOLGA8OA6NCC3 632 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GOLGA8NF8WBI6 632 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 DCLK1O15075 740 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 ATP9BO43861 1147 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 CCR10P46092 362 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 AQP4P55087 323 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 SOX4Q06945 474 aaPredicted RBP17.22■□□□□ 0.35
CHRNE-201ENST00000293780 DPYSQ14117 519 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 CCDC153Q494R4 210 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GALNT15Q8N3T1 639 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 DNAAF3Q8N9W5 541 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 OPTNQ96CV9 577 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 TRAPPC9Q96Q05 1148 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 NPY6RQ99463 290 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
CHRNE-201ENST00000293780 I6L893 689 aaPredicted RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 DAB1O75553 588 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 ERCC2P18074 760 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 SPRP35270 261 aaPredicted RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 SERPINB8P50452 374 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 LIMK2P53671 638 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 KLF10Q13118 480 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 PAFAH1B3Q15102 231 aaKnown RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 ZNF792Q3KQV3 632 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 CFAP157Q5JU67 520 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 FBXW8Q8N3Y1 598 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
CHRNE-201ENST00000293780 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
CHRNE-201ENST00000293780 G3BP2Q9UN86 482 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms