RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 DONSONQ9NYP3 566 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SLC24A2Q9UI40 661 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SHROOM3Q8TF72 1996 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 COL4A1P02462 1669 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 DPYSL4O14531 572 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PLA2G6O60733 806 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 DNAJC8O75937 253 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 FGFR1P11362 822 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MRPS22P82650 360 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 MGAT5Q09328 741 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 P2RY11Q96G91 374 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MTG1Q9BT17 334 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 TRMT13Q9NUP7 481 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 BTRCQ9Y297 605 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MYBPHLA2RUH7 354 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SAC3D1A6NKF1 404 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SYCE1LA8MT33 242 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 STX7O15400 261 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 UNGP13051 313 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 CTPS1P17812 591 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ESRRGP62508 458 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MED21Q13503 144 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PSMD5Q16401 504 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MARC1Q5VT66 337 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SNX32Q86XE0 403 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 DCP1BQ8IZD4 617 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 GFM2Q969S9 779 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 HBEGFQ99075 208 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ACOX2Q99424 681 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 TBL1YQ9BQ87 522 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SEMA4BQ9NPR2 832 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 ZNF358Q9NW07 568 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 RBPJLQ9UBG7 517 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 N4BP2Q86UW6 1770 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 TM9SF1O15321 606 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 EDIL3O43854 480 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SPAG6O75602 509 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ANXA9O76027 345 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PIGNO95427 931 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CYLC2Q14093 348 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 PFKFB4Q16877 469 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PGS1Q32NB8 556 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 TAS1R3Q7RTX0 852 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PARP8Q8N3A8 854 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 FITM2Q8N6M3 262 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 INPP5DQ92835 1189 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 FOXP3Q9BZS1 431 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SDCBP2Q9H190 292 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 WDR55Q9H6Y2 383 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 CHRAC1Q9NRG0 131 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ARL8BQ9NVJ2 186 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 CRLS1Q9UJA2 301 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PPP2R3BQ9Y5P8 575 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SMIM28A0A1B0GU29 152 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 KLHL2O95198 593 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ALDH2P05091 517 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 CDC42EP1Q00587 391 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 MSS51Q4VC12 460 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 RIPOR1Q6ZS17 1223 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ANKS1BQ7Z6G8 1248 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 PLD5Q8N7P1 536 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ATP6V0D2Q8N8Y2 350 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 ATAD1Q8NBU5 361 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 WNT8BQ93098 351 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 DCUN1D1Q96GG9 259 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 THUMPD3Q9BV44 507 aaKnown RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 HAPLN2Q9GZV7 340 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
UBR1-201ENST00000290650 ENTPD7Q9NQZ7 604 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 KIAA1257Q9ULG3 409 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 LZTS1Q9Y250 596 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 SCN9AQ15858 1988 aa4.88□□□□□ -1.63
UBR1-201ENST00000290650 NRCAMQ92823 1304 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CNTRLQ7Z7A1 2325 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CILPO75339 1184 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ABCB1P08183 1280 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 CCNB1P14635 433 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ATP4AP20648 1035 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CALB2P22676 271 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PTPN4P29074 926 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 EEF1DP29692 281 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 ABL2P42684 1182 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CDH13P55290 713 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SNX17Q15036 470 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 DNAL1Q4LDG9 190 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 LRRC73Q5JTD7 316 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RFWD3Q6PCD5 774 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TSHZ1Q6ZSZ6 1077 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MFN1Q8IWA4 741 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MFSD3Q96ES6 412 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CDRT15Q96T59 188 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 YME1L1Q96TA2 773 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 BTBD10Q9BSF8 475 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CIPCQ9C0C6 399 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 BRD8Q9H0E9 1235 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RUBCNLQ9H714 662 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms