RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 EEF2KO00418 725 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 PTPN7P35236 360 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 GPD2P43304 727 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF132P52740 706 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ADARP55265 1226 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 STX1BP61266 288 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 CCNIQ14094 377 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 GNASQ5JWF2 1037 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 LPCAT2Q7L5N7 544 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 RNF168Q8IYW5 571 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 USP29Q9HBJ7 922 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 AFG3L2Q9Y4W6 797 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 HES2Q9Y543 173 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 LAMB2P55268 1798 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SMIM31A0A1B0GVY4 71 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SAC3D1A6NKF1 404 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 CAPN14A8MX76 684 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 MSCO60682 206 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 MCF2P10911 925 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 PGAM1P18669 254 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 NADK2Q4G0N4 442 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 TRIM67Q6ZTA4 783 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SLC7A14Q8TBB6 771 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 GPR25O00155 361 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 IRF9Q00978 393 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 GJC2Q5T442 439 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 DSELQ8IZU8 1212 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 LIN28AQ9H9Z2 209 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 PSMD13Q9UNM6 376 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 TK2O00142 265 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 AOC1P19801 751 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ETFBP38117 255 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 TPI1P60174 286 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 SLC12A1Q13621 1099 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 KCTD21Q4G0X4 260 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 AGKQ53H12 422 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 TMC7Q7Z402 723 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 PDCD6IPQ8WUM4 868 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 LRRC40Q9H9A6 602 aa13.68□□□□□ -0.22
SCAF4-201ENST00000286835 CHCHD3Q9NX63 227 aaKnown RBP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCAF4-201ENST00000286835 ANKRD12Q6UB98 2062 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 A0A0A0MRY4 1105 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 DFFAO00273 331 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 STRNO43815 780 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CILPO75339 1184 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 GRIA4P48058 902 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 THOP1P52888 689 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 C16orf72Q14CZ0 275 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 IPMKQ8NFU5 416 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 ELMO2Q96JJ3 720 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 SPATA13Q96N96 652 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 FAM193BQ96PV7 902 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 TMPRSS4Q9NRS4 437 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 MAFO75444 373 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 ALDOAP04075 364 aaKnown RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CMPK2Q5EBM0 449 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 MBLAC2Q68D91 279 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 MYO1HQ8N1T3 1032 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 PQLC3Q8N755 202 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 MFSD3Q96ES6 412 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CDH19Q9H159 772 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 ATXN3LQ9H3M9 355 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 SLC4A1P02730 911 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 C2P06681 752 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 FGF3P11487 239 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 TSPAN8P19075 237 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 RALGDSQ12967 914 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 POU6F1Q14863 301 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 DEFB106AQ8N104 65 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 APBB2Q92870 758 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 PHF21BQ96EK2 531 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 MROH8Q9H579 483 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 ZFYVE28Q9HCC9 887 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms