RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PRDM16Q9HAZ2 1276 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 RNF14Q9UBS8 474 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 COL4A3Q01955 1670 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 TYW5A2RUC4 315 aaKnown RBP22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 TRIM24O15164 1050 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 NFATC1O95644 943 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 ADH5P11766 374 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 ZFXP17010 805 aaPredicted RBP22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 TGM2P21980 687 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 MAPKAPK2P49137 400 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 ZNF177Q13360 481 aaPredicted RBP22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 CCDC181Q5TID7 509 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 B4GALNT4Q76KP1 1039 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 MFN1Q8IWA4 741 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 C1orf54Q8WWF1 131 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 P3H4Q92791 437 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 NXPE3Q969Y0 559 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 IGSF9Q9P2J2 1179 aa22.38■■□□□ 1.17
PDLIM3-203ENST00000284771 H0Y626 953 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 HOXC11O43248 304 aaPredicted RBP22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 ZP2Q05996 745 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 SETD3Q86TU7 594 aaPredicted RBP22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 ADHFE1Q8IWW8 467 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 FIBINQ8TAL6 211 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 LMLNQ96KR4 655 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 OLFM3Q96PB7 478 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 BRD9Q9H8M2 597 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 L2HGDHQ9H9P8 463 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 FBXO10Q9UK96 956 aa22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 NYNRINQ9P2P1 1898 aaKnown RBP22.37■■□□□ 1.17
PDLIM3-203ENST00000284771 TICRRQ7Z2Z1 1910 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 ADH1CP00326 375 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 HLA-FP30511 346 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 PAFAH1B1P43034 410 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 GAD2Q05329 585 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 MESP2Q0VG99 397 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 NOMO1Q15155 1222 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 NAIF1Q69YI7 327 aaPredicted RBP22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 ARHGAP36Q6ZRI8 547 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 ETFBKMTQ8IXQ9 262 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 LZTR1Q8N653 840 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 ALG14Q96F25 216 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 TCF20Q9UGU0 1960 aaKnown RBP22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 KRIT1O00522 736 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 CACNG3O60359 315 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 MZF1P28698 734 aaPredicted RBP22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 CD70P32970 193 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 ACVRL1P37023 503 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 NR2C2P49116 596 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 NDST2P52849 883 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 CDH18Q13634 790 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 TUBB2AQ13885 445 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 WHAMMP3Q1A5X7 153 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 NAP1L3Q99457 506 aaPredicted RBP22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 TUBB2BQ9BVA1 445 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 C10orf88Q9H8K7 445 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 OR51B4Q9Y5P0 310 aa22.36■■□□□ 1.17
PDLIM3-203ENST00000284771 TRIOO75962 3097 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 RASA4BC9J798 803 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 RASA4O43374 803 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 NARSO43776 548 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 BMP1P13497 986 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 GJA4P35212 333 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 SERPINB6P35237 376 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 SLC6A11P48066 632 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 GNA12Q03113 381 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 LMAN2Q12907 356 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 POLD3Q15054 466 aaPredicted RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 KCTD19Q17RG1 926 aaPredicted RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 FAM182AQ5T1J6 154 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 C6orf118Q5T5N4 469 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 IER5LQ5T953 404 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 ZNF572Q7Z3I7 529 aaPredicted RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 ZC3H18Q86VM9 953 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 SPATA4Q8NEY3 305 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 OR7D4Q8NG98 312 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 SLC35B2Q8TB61 432 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 ARHGEF2Q92974 986 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 HMCESQ96FZ2 354 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 LGMNQ99538 433 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 PRKAG3Q9UGI9 489 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 INTS6Q9UL03 887 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 DNPEPQ9ULA0 475 aa22.35■■□□□ 1.17
PDLIM3-203ENST00000284771 ILVBLA1L0T0 632 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 RAMP2O60895 175 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 RHOCP08134 193 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 CISD3P0C7P0 127 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 PAPOLAP51003 745 aaKnown RBP22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 GALNT2Q10471 571 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 RNF219Q5W0B1 726 aaPredicted RBP22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 APCDD1Q8J025 514 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 CPA6Q8N4T0 437 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 MAIP1Q8WWC4 291 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 FEM1AQ9BSK4 669 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 RBM12Q9NTZ6 932 aaKnown RBP22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 ABCB8Q9NUT2 735 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 DONSONQ9NYP3 566 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 COL4A2P08572 1712 aa22.34■■□□□ 1.17
PDLIM3-203ENST00000284771 MIA3Q5JRA6 1907 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms