RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 WDR55Q9H6Y2 383 aaPredicted RBP11.62□□□□□ -0.55
SCLT1-201ENST00000281142 COG4Q9H9E3 785 aa11.62□□□□□ -0.55
SCLT1-201ENST00000281142 PAIP2BQ9ULR5 123 aaKnown RBP11.62□□□□□ -0.55
SCLT1-201ENST00000281142 TDRKHQ9Y2W6 561 aaKnown RBP11.62□□□□□ -0.55
SCLT1-201ENST00000281142 ENDOD1O94919 500 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 SERPINE1P05121 402 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 BCAR1P56945 870 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 GBE1Q04446 702 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 CAPSQ13938 189 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 SLFN12LQ6IEE8 588 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PTAR1Q7Z6K3 402 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 FAM156AQ8NDB6 213 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PKP2Q99959 881 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 WDR37Q9Y2I8 494 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 MFHAS1Q9Y4C4 1052 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 M0QYV0 167 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 MICAL2O94851 1124 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 LDHAP00338 332 aaKnown RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ELNP15502 786 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF24P17028 368 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ICAM3P32942 547 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PGGT1BP53609 377 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ABCE1P61221 599 aaKnown RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 TRIM32Q13049 653 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 CYTH1Q15438 398 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 LY6KQ17RY6 165 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ABHD15Q6UXT9 468 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PACS1Q6VY07 963 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 NCCRP1Q6ZVX7 275 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PLD6Q8N2A8 252 aaKnown RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PPP4R1Q8TF05 950 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 MARK4Q96L34 752 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 CDRT15Q96T59 188 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 CEP41Q9BYV8 373 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 DNAJC28Q9NX36 388 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 BARX2Q9UMQ3 279 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PCDHA11Q9Y5I1 949 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PIGRP01833 764 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 RALBP11234 206 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PDGFRAP16234 1089 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 DPP6P42658 865 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 MAGEA3P43357 314 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 SESN2P58004 480 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 PHEXP78562 749 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 TSHZ1Q6ZSZ6 1077 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 SNX32Q86XE0 403 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 WDR49Q8IV35 697 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 TMEM192Q8IY95 271 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 IRGQQ8WZA9 623 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 LRGUKQ96M69 825 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 ELOVL4Q9GZR5 314 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 NGRNQ9NPE2 291 aaKnown RBP11.61□□□□□ -0.55
SCLT1-201ENST00000281142 NDUFA13Q9P0J0 144 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 SSX2IPQ9Y2D8 614 aa11.61□□□□□ -0.55
SCLT1-201ENST00000281142 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 MAFGO15525 162 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 GNRH1P01148 92 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ATP5BP06576 529 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 TFE3P19532 575 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 HOXD10P28358 340 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 RGS7P49802 495 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 HDAC4P56524 1084 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 OLIG2Q13516 323 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 EML3Q32P44 896 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 LRRC43Q8N309 656 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 SLC4A11Q8NBS3 891 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 NLRP4Q96MN2 994 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 VTA1Q9NP79 307 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 MOCS1Q9NZB8 636 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 HES2Q9Y543 173 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 APOL1O14791 398 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 RPL10P27635 214 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ARL2P36404 184 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ADCYAP1R1P41586 468 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 NAMPTP43490 491 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 CD97P48960 835 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ATXN1P54253 815 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 COG7P83436 770 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 IRF5Q13568 498 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 CYLC2Q14093 348 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 TFDP2Q14188 446 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 NRF1Q16656 503 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 DUOXA2Q1HG44 320 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 TMEM198Q66K66 360 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 OR6B2Q6IFH4 312 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF410Q86VK4 478 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms