RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NPHS2Q9NP85 383 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 HS3ST4Q9Y661 456 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 MYO16Q9Y6X6 1858 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 UBOX5O94941 541 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 ZWINTO95229 277 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 BGNP21810 368 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 PRKCHP24723 683 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 GALNT2Q10471 571 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 RASSF3Q86WH2 238 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 OXNAD1Q96HP4 312 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-201ENST00000279247 PAK6Q9NQU5 681 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-201ENST00000279247 KLHL14Q9P2G3 628 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 PTPRDP23468 1912 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 NLRC5Q86WI3 1866 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 CSPG5O95196 566 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 APOPT1Q96IL0 206 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 MARCH5Q9NX47 278 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 ZFATQ9P243 1243 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 FETUBQ9UGM5 382 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 CDY1Q9Y6F8 540 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 KRT38O76015 456 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 TSHRP16473 764 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 PLEKHG4Q58EX7 1191 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 HDAC11Q96DB2 347 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF419Q96HQ0 510 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-201ENST00000279247 FCRL3Q96P31 734 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-201ENST00000279247 SMOC2Q9H3U7 446 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 HIPK3Q9H422 1215 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 CHRAC1Q9NRG0 131 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 TXNDC16Q9P2K2 825 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 PHF24Q9UPV7 400 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 TTC24A2A3L6 582 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-201ENST00000279247 E9PAM4 449 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 ADAM12O43184 909 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 PMPCBO75439 489 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 SAT1P21673 171 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 SCTRP47872 440 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 PGGT1BP53609 377 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 TBX4P57082 545 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 PCSK7Q16549 785 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 SPOUT1Q5T280 376 aaKnown RBP18.35■□□□□ 0.53
CAPN1-201ENST00000279247 LGSNQ5TDP6 509 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 C16orf46Q6P387 395 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 MON1AQ86VX9 555 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 BCL7CQ8WUZ0 217 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-201ENST00000279247 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 IGSF9Q9P2J2 1179 aa18.35■□□□□ 0.53
CAPN1-201ENST00000279247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-201ENST00000279247 HMX2A2RU54 273 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 TRDMT1O14717 391 aaKnown RBP18.34■□□□□ 0.53
CAPN1-201ENST00000279247 SCAMP3O14828 347 aaKnown RBP18.34■□□□□ 0.53
CAPN1-201ENST00000279247 CCNB1P14635 433 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 YWHAQP27348 245 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 HCAR3P49019 387 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 PDE1BQ01064 536 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 ITKQ08881 620 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 MGAT5Q09328 741 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 RASA2Q15283 850 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 PIK3R6Q5UE93 754 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
CAPN1-201ENST00000279247 PPM1EQ8WY54 764 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF778Q96MU6 729 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 ARL2BPQ9Y2Y0 163 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 SF3B1O75533 1304 aaKnown RBP eCLIP18.34■□□□□ 0.533e-6■■■■■ 68.7
CAPN1-201ENST00000279247 NCAM2O15394 837 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 CNTN5O94779 1100 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 IGLV3-25P01717 112 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 RAP1GAP2Q684P5 730 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 OTOAQ7RTW8 1153 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 CCSER2Q9H7U1 834 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
CAPN1-201ENST00000279247 SLC12A8A0AV02 714 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 FAM159BA6NKW6 160 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 MAXP61244 160 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 ITIH4Q14624 930 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 HSP90AA5PQ58FG0 334 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 RASIP1Q5U651 963 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 PABPC5Q96DU9 382 aaKnown RBP18.33■□□□□ 0.53
CAPN1-201ENST00000279247 SERPINB11Q96P15 392 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 KLHL5Q96PQ7 755 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 MANSC1Q9H8J5 431 aa18.33■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF395Q9H8N7 513 aaPredicted RBP18.33■□□□□ 0.53
CAPN1-201ENST00000279247 MTMR11A4FU01 709 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 RFPL1O75677 317 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 AP2A1O95782 977 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 POLBP06746 335 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 GALTP07902 379 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 PGAM1P18669 254 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 CDK16Q00536 496 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 POU6F1Q14863 301 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 TRIM60Q495X7 471 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 YTHDF3Q7Z739 585 aaKnown RBP18.33■□□□□ 0.52
CAPN1-201ENST00000279247 ARHGAP12Q8IWW6 846 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 FITM2Q8N6M3 262 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 CDKL2Q92772 493 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 TEKT5Q96M29 485 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms