RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 FBXW11Q9UKB1 542 aa9.2□□□□□ -0.94
SEC16A-201ENST00000277537 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
SEC16A-201ENST00000277537 GYG2O15488 501 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 PIRTP0C851 137 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CTGFP29279 349 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 SLC11A2P49281 568 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CDH17Q12864 832 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 PLD1Q13393 1074 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 NLRP9Q7RTR0 991 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 LINC00523Q86TU6 105 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 MTDHQ86UE4 582 aaKnown RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 MON1AQ86VX9 555 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 EXOC2Q96KP1 924 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.948e-7■■■■□ 24.2
SEC16A-201ENST00000277537 NPY6RQ99463 290 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 EPB41L4BQ9H329 900 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 ARHGEF38Q9NXL2 777 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 HAO1Q9UJM8 370 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 APOBEC2Q9Y235 224 aaKnown RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 PGAM1P18669 254 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 GEMP55040 296 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 IKBKEQ14164 716 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 POLD3Q15054 466 aaPredicted RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 KCNMB4Q86W47 210 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 HIPK4Q8NE63 616 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CCT6BQ92526 530 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 GCNAQ96QF7 691 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TMEM109Q9BVC6 243 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CXorf56Q9H5V9 222 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TMLHEQ9NVH6 421 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TCRBV5S1A1TA0A578 114 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 H0Y626 953 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 ARVCFO00192 962 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 GPC4O75487 556 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 DDHD2O94830 711 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 URODP06132 367 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 ENO1P06733 434 aaKnown RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 PTPN7P35236 360 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TRIM68Q6AZZ1 485 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 FUT10Q6P4F1 479 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CMC1Q7Z7K0 106 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 MYLK4Q86YV6 388 aaPredicted RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 ZNF296Q8WUU4 475 aaPredicted RBP9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CASP10Q92851 521 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CENPTQ96BT3 561 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 HDAC11Q96DB2 347 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 MFSD3Q96ES6 412 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 APOPT1Q96IL0 206 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CYLDQ9NQC7 956 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 CHRAC1Q9NRG0 131 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 TRHDEQ9UKU6 1024 aa9.19□□□□□ -0.94
SEC16A-201ENST00000277537 LOXHD1Q8IVV2 1947 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CLUHO75153 1309 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 BAG2O95816 211 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 MYL2P10916 166 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 ZNF177Q13360 481 aaPredicted RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 RFWD3Q6PCD5 774 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 SLAIN1Q8ND83 568 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 LRRC39Q96DD0 335 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TTPALQ9BTX7 342 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 USP29Q9HBJ7 922 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 NME7Q9Y5B8 376 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CXorf49A8MYA2 514 aaPredicted RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TPP1O14773 563 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 EOMESO95936 686 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 HOXD8P13378 290 aaPredicted RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 GP5P40197 560 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TM4SF4P48230 202 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 RENBPP51606 427 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 MPP2Q14168 576 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TEX44Q53QW1 395 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 SLC9A4Q6AI14 798 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TIGD7Q6NT04 549 aaPredicted RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 KLC3Q6P597 504 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 ALKAL1Q6UXT8 129 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TAS2R42Q7RTR8 314 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 DENND1CQ8IV53 801 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CARNMT1Q8N4J0 409 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 ATXN2LQ8WWM7 1075 aaKnown RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CERS2Q96G23 380 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 SUSD3Q96L08 255 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 MRPL9Q9BYD2 267 aaKnown RBP9.18□□□□□ -0.94
SEC16A-201ENST00000277537 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 KLC4Q9NSK0 619 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 LOC100653049A0A140TA62 436 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 C5orf60A6NFR6 353 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 TM9SF1O15321 606 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 CFLARO15519 480 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 PSMD3O43242 534 aa9.18□□□□□ -0.94
SEC16A-201ENST00000277537 GCATO75600 419 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms