RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GRID1Q9ULK0 1009 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 GREB1Q4ZG55 1949 aa17.03■□□□□ 0.32
CCDC40-201ENST00000269318 ERI2A8K979 691 aaKnown RBP17.02■□□□□ 0.32
CCDC40-201ENST00000269318 WASH4PA8MWX3 477 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 DFFAO00273 331 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 ADAM12O43184 909 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 CACNG3O60359 315 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 TBX18O95935 607 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 JCHAINP01591 159 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 NFKB1P19838 968 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 TAC1P20366 129 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 EFEMP1Q12805 493 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 OLIG2Q13516 323 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 TTC39BQ5VTQ0 682 aaPredicted RBP17.02■□□□□ 0.32
CCDC40-201ENST00000269318 SLC8B1Q6J4K2 584 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 TGS1Q96RS0 853 aaKnown RBP17.02■□□□□ 0.32
CCDC40-201ENST00000269318 SLC39A8Q9C0K1 460 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 TLR8Q9NR97 1041 aaKnown RBP17.02■□□□□ 0.32
CCDC40-201ENST00000269318 SYBUQ9NX95 663 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 NUP205Q92621 2012 aa17.02■□□□□ 0.32
CCDC40-201ENST00000269318 UGT1A9O60656 530 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 MAFKO60675 156 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 UPP2O95045 317 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 ZWINTO95229 277 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 MT-ND3P03897 115 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 ZDHHC11BP0C7U3 371 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 PGAM1P18669 254 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 SLC18A2Q05940 514 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 TRIP4Q15650 581 aaPredicted RBP17.02■□□□□ 0.31
CCDC40-201ENST00000269318 NUGGCQ68CJ6 796 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 YTHDF3Q7Z739 585 aaKnown RBP17.02■□□□□ 0.31
CCDC40-201ENST00000269318 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 OR52K1Q8NGK4 314 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 ZNF419Q96HQ0 510 aaPredicted RBP17.02■□□□□ 0.31
CCDC40-201ENST00000269318 NAT9Q9BTE0 207 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 NSRP1Q9H0G5 558 aaKnown RBP17.02■□□□□ 0.31
CCDC40-201ENST00000269318 UGT1A7Q9HAW7 530 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 UGT1A10Q9HAW8 530 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 UGT1A8Q9HAW9 530 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 CASS4Q9NQ75 786 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 OLA1Q9NTK5 396 aaKnown RBP17.02■□□□□ 0.31
CCDC40-201ENST00000269318 FGFR1OP2Q9NVK5 253 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 MPP6Q9NZW5 540 aa17.02■□□□□ 0.31
CCDC40-201ENST00000269318 ARHGAP42A6NI28 874 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 OAS1P00973 400 aaKnown RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 ATF6P18850 670 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 GBP2P32456 591 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 IKBKEQ14164 716 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 MS4A13Q5J8X5 152 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 CASC4Q6P4E1 433 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 CNKSR3Q6P9H4 555 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 TTC17Q96AE7 1141 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 ELAC2Q9BQ52 826 aaKnown RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-201ENST00000269318 FNIP2Q9P278 1114 aa17.01■□□□□ 0.31
CCDC40-201ENST00000269318 TM9SF1O15321 606 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 SNX3O60493 162 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 SNRPAP09012 282 aaKnown RBP17■□□□□ 0.31
CCDC40-201ENST00000269318 NIPAL4Q0D2K0 466 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 CRYMQ14894 314 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 USP41Q3LFD5 358 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 UNC5BQ8IZJ1 945 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 CCDC197Q8NCU1 140 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 DIS3LQ8TF46 1054 aaKnown RBP17■□□□□ 0.31
CCDC40-201ENST00000269318 IGSF21Q96ID5 467 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 CABS1Q96KC9 395 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 PAIP2Q9BPZ3 127 aaKnown RBP17■□□□□ 0.31
CCDC40-201ENST00000269318 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 TTLL2Q9BWV7 592 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 MARCH2Q9P0N8 246 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 SAMD15Q9P1V8 674 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 BACE2Q9Y5Z0 518 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 SHROOM3Q8TF72 1996 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 IGLV3-10A0A075B6K4 115 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 HMX2A2RU54 273 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 SLC38A8A6NNN8 435 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 TRIM49D1C9J1S8 452 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 ANKRD65E5RJM6 399 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 USP12O75317 370 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 KRT37O76014 449 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 CCNB1P14635 433 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 NEK3P51956 506 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 CORO7P57737 925 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 IFT88Q13099 833 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 PSMD5Q16401 504 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 PDK4Q16654 411 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 LVRNQ6Q4G3 990 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 TCP10LQ8TDR4 215 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 GIPC2Q8TF65 315 aa17■□□□□ 0.31
CCDC40-201ENST00000269318 NOL6Q9H6R4 1146 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms