RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ZCCHC9Q8N567 271 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 HJURPQ8NCD3 748 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 C17orf80Q9BSJ5 609 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 SLC24A3Q9HC58 644 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 CRYL1Q9Y2S2 319 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 ACTN3Q08043 901 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 CACHD1Q5VU97 1274 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 FUT10Q6P4F1 479 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 NPAS4Q8IUM7 802 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ICA1LQ8NDH6 482 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 NTPCRQ9BSD7 190 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 YY1AP1Q9H869 796 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ACTR8Q9H981 624 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 NMRK1Q9NWW6 199 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 A0A096LPK6 155 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 NOL4O94818 638 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ALOX15P16050 662 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 ABCG1P45844 678 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 SNRPD1P62314 119 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 SLC25A52Q3SY17 297 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 SETD3Q86TU7 594 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.17
NPC1-201ENST00000269228 PRELID2Q8N945 189 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 DACT3Q96B18 629 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 NRBF2Q96F24 287 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 SRPK1Q96SB4 655 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 SEMA3CQ99985 751 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 TLE6Q9H808 572 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 NCKAP1Q9Y2A7 1128 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 CCT8L1PA6NM43 557 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 EVPLLA8MZ36 301 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 CYP3A5P20815 502 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 NME5P56597 212 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 OTUB1Q96FW1 271 aaPredicted RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 FAR2Q96K12 515 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 ZCCHC2Q9C0B9 1178 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 GDF3Q9NR23 364 aa13.98□□□□□ -0.17
NPC1-201ENST00000269228 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
NPC1-201ENST00000269228 M0R2N6 131 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 MDM4O15151 490 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 MPOP05164 745 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 ADSSP30520 456 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 FMO4P31512 558 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SEL1L3Q68CR1 1132 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SERPINA13PQ6UXR4 307 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 USP45Q70EL2 814 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 DAW1Q8N136 415 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 HES6Q96HZ4 224 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CPNE1Q99829 537 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 GMIPQ9P107 970 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 PAGE1O75459 146 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 MT-CO1P00395 513 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 FLT3P36888 993 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 MAXP61244 160 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 FAAP100Q0VG06 881 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SMARCB1Q12824 385 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 PPIGQ13427 754 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■□□□ 13.1
NPC1-201ENST00000269228 RARS2Q5T160 578 aaKnown RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 NEPROQ6NW34 567 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 NSL1Q96IY1 281 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CCDC90BQ9GZT6 254 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.176e-6■■□□□ 14
NPC1-201ENST00000269228 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 INPP1P49441 399 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 AQP5P55064 265 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 PKN2Q16513 984 aaKnown RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SYTL1Q8IYJ3 562 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 TDRD5Q8NAT2 981 aaKnown RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 DPEP3Q9H4B8 488 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CDHR5Q9HBB8 845 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CAPN10Q9HC96 672 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 REXO2Q9Y3B8 237 aaKnown RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 AKAP10O43572 662 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 GRK2P25098 689 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CDC25CP30307 473 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SERPINB5P36952 375 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 SETMARQ53H47 684 aaPredicted RBP13.97□□□□□ -0.17
NPC1-201ENST00000269228 XYLT1Q86Y38 959 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CFAP52Q8N1V2 620 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 ALLCQ8N6M5 410 aa13.97□□□□□ -0.17
NPC1-201ENST00000269228 CHADO15335 359 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 OR56A5P0C7T3 313 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ACRP10323 421 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 GRK3P35626 688 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 TLE2Q04725 743 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 OLFML2BQ68BL8 750 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms