RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 CCZ1BP86790 482 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CCZ1P86791 482 aaPredicted RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 GNA13Q14344 377 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ITIH4Q14624 930 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 INPP5AQ14642 412 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 EFL1Q7Z2Z2 1120 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 FRMD5Q7Z6J6 570 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 EGFL6Q8IUX8 553 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 PHYKPLQ8IUZ5 450 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ZNF384Q8TF68 577 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 BAP1Q92560 729 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 SLC29A3Q9BZD2 475 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 NOL6Q9H6R4 1146 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 ZDHHC6Q9H6R6 413 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 LIMA1Q9UHB6 759 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 ZNF112Q9UJU3 913 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 TBX20Q9UMR3 447 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 AURKCQ9UQB9 309 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CCDC195A0A1B0GUA6 201 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 FAM187AA6NFU0 413 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 VPS26AO75436 327 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CYP3A4P08684 503 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 TLX1P31314 330 aaPredicted RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 ARL4CP56559 192 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 NDUFA5Q16718 116 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 TTC33Q6PID6 262 aaPredicted RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 AGMOQ6ZNB7 445 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 MICU2Q8IYU8 434 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CELF5Q8N6W0 485 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 CAPSLQ8WWF8 208 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 LRRC39Q96DD0 335 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CLPBQ9H078 707 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 FAM105AQ9NUU6 356 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 RIPK3Q9Y572 518 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 SYNDIG1LA6NDD5 238 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 RAMP2O60895 175 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 OR56A5P0C7T3 313 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 EPHB2P29323 1055 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ALDH18A1P54886 795 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 RBPJQ06330 500 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CAPRIN1Q14444 709 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 TRIM65Q6PJ69 517 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 TAF8Q7Z7C8 310 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 TMEM192Q8IY95 271 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ACE2Q9BYF1 805 aaPredicted RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 FOXP3Q9BZS1 431 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 PAIP1Q9H074 479 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 DDX47Q9H0S4 455 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 ARHGEF4Q9NR80 690 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 LRCH1Q9Y2L9 728 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 KLHL20Q9Y2M5 609 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 PJA2O43164 708 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ATP9BO43861 1147 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 HLA-DRAP01903 254 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CYP2A7P20853 494 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 VARSP26640 1264 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 GTF2H1P32780 548 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 BNC1Q01954 994 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 PIGHQ14442 188 aaPredicted RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 EMC10Q5UCC4 262 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 C11orf96Q7Z7L8 435 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 INPP5DQ92835 1189 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 NDST4Q9H3R1 872 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 NPHS2Q9NP85 383 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 DDX18Q9NVP1 670 aaKnown RBP7.98□□□□□ -1.13
USP3-201ENST00000268049 MARCH2Q9P0N8 246 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 MBD2Q9UBB5 411 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 ATP6V1HQ9UI12 483 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 CNTNAP1P78357 1384 aa7.98□□□□□ -1.13
USP3-201ENST00000268049 B2RBV5 119 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 AKAP10O43572 662 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 MED24O75448 989 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 TIPRLO75663 272 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
USP3-201ENST00000268049 EPHX1P07099 455 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 TRADDQ15628 312 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 ZNF544Q6NX49 715 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 ZPBP2Q6X784 338 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 GKN2Q86XP6 184 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 HEXDCQ8WVB3 486 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 SLC5A5Q92911 643 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 ZIM3Q96PE6 472 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 TMEM245Q9H330 911 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 NEK6Q9HC98 313 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 ARHGEF38Q9NXL2 777 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 CARD8Q9Y2G2 431 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 C4AP0C0L4 1744 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.97□□□□□ -1.13
USP3-201ENST00000268049 F8VZ95 297 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 AP5Z1O43299 807 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 PEX10O60683 326 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 VIPP01282 170 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 KCNA2P16389 499 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 IL12RB1P42701 662 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 PRCPP42785 496 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 SLC1A1P43005 524 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 KRT72Q14CN4 511 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 MAPRE2Q15555 327 aa7.97□□□□□ -1.13
USP3-201ENST00000268049 SNAP47Q5SQN1 464 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms