RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CA8P35219 290 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 HARS2P49590 506 aaKnown RBP16.77■□□□□ 0.28
TPM1-201ENST00000267996 IFI35P80217 286 aaPredicted RBP16.77■□□□□ 0.28
TPM1-201ENST00000267996 ZBTB17Q13105 803 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 STAT4Q14765 748 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 BBS9Q3SYG4 887 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.28
TPM1-201ENST00000267996 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 C6orf118Q5T5N4 469 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 EMC10Q5UCC4 262 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 PID1Q7Z2X4 250 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 CHSY1Q86X52 802 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 TMC8Q8IU68 726 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 ATPAF2Q8N5M1 289 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 MYEOVQ96EZ4 313 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 C17orf80Q9BSJ5 609 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 CEP41Q9BYV8 373 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 ENTPD7Q9NQZ7 604 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 TLR9Q9NR96 1032 aa16.77■□□□□ 0.28
TPM1-201ENST00000267996 KLHL8Q9P2G9 620 aaPredicted RBP16.77■□□□□ 0.28
TPM1-201ENST00000267996 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
TPM1-201ENST00000267996 OBSL1O75147 1896 aa16.77■□□□□ 0.27
TPM1-201ENST00000267996 SHROOM3Q8TF72 1996 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 A0A087WUV0 522 aaPredicted RBP16.76■□□□□ 0.27
TPM1-201ENST00000267996 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 DFFAO00273 331 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 RASGRF2O14827 1237 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 CACNG3O60359 315 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 C8AP07357 584 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 MLNP12872 115 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 PSMB4P28070 264 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 CD68P34810 354 aaPredicted RBP16.76■□□□□ 0.27
TPM1-201ENST00000267996 SLC11A2P49281 568 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 GPX6P59796 221 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 CCDC38Q502W7 563 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 HP1BP3Q5SSJ5 553 aaPredicted RBP16.76■□□□□ 0.27
TPM1-201ENST00000267996 SYCP2LQ5T4T6 812 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 PLPP4Q5VZY2 271 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 ARHGAP36Q6ZRI8 547 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 RTL10Q7L3V2 364 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 ANKMY2Q8IV38 441 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 AGGF1Q8N302 714 aaeCLIP16.76■□□□□ 0.27
TPM1-201ENST00000267996 ATP11CQ8NB49 1132 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 PYROXD1Q8WU10 500 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 TLCD1Q96CP7 247 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 ZFRQ96KR1 1074 aaKnown RBP16.76■□□□□ 0.27
TPM1-201ENST00000267996 IL12RB2Q99665 862 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 GORASP1Q9BQQ3 440 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 GBA3Q9H227 469 aa16.76■□□□□ 0.27
TPM1-201ENST00000267996 XAB2Q9HCS7 855 aaKnown RBP16.76■□□□□ 0.27
TPM1-201ENST00000267996 E7EVH7 732 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 F5H5T6 163 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 MATN3O15232 486 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 GLUD1P00367 558 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 JCHAINP01591 159 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 LRG1P02750 347 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 SLC6A4P31645 630 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 MAPKAPK2P49137 400 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 PAPOLAP51003 745 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 GYS2P54840 703 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 CAMK1Q14012 370 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 KCTD16Q68DU8 428 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 ITPRIPL1Q6GPH6 555 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 IGDCC3Q8IVU1 814 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 SH2D3CQ8N5H7 860 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 FBXO36Q8NEA4 188 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 EPS8L3Q8TE67 593 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 MAML1Q92585 1016 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 RPRD1AQ96P16 312 aaPredicted RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 GKN1Q9NS71 199 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 MTCL1Q9Y4B5 1905 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 NYNRINQ9P2P1 1898 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 DENND4CQ5VZ89 1909 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 AVILO75366 819 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 LATS1O95835 1130 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 CORO1AP31146 461 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 ELK3P41970 407 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 CLCN4P51793 760 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 C9orf50Q5SZB4 431 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 GAREM2Q75VX8 874 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 SPRED2Q7Z698 418 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 TFAP2DQ7Z6R9 452 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 LGI2Q8N0V4 545 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 FAM76AQ8TAV0 307 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 IPO11Q9UI26 975 aaKnown RBP16.75■□□□□ 0.27
TPM1-201ENST00000267996 STOML2Q9UJZ1 356 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 ADAM21Q9UKJ8 722 aa16.75■□□□□ 0.27
TPM1-201ENST00000267996 RASA4BC9J798 803 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 RASA4O43374 803 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 SUN1O94901 812 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 PEX11BO96011 259 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 IVLP07476 585 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 CCNB1P14635 433 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms