RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ZNF556Q9HAH1 456 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 NOD2Q9HC29 1040 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 TEKT2Q9UIF3 430 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 BLOC1S6Q9UL45 172 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 V9GYQ6 96 aa15.71■□□□□ 0.11
TIMP3-201ENST00000266085 ADAMTSL3P82987 1691 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 TLR5O60602 858 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 IGSF6O95976 241 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 TNFRSF8P28908 595 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 SOAT1P35610 550 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 RAP1GDS1P52306 607 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 NAB1Q13506 487 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 CAMK2GQ13555 558 aaPredicted RBP15.71■□□□□ 0.1
TIMP3-201ENST00000266085 GLT6D1Q7Z4J2 308 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 OOSP2Q86WS3 158 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 CACUL1Q86Y37 369 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 CORO1BQ9BR76 489 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 RXFP1Q9HBX9 757 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 LNPEPQ9UIQ6 1025 aa15.71■□□□□ 0.1
TIMP3-201ENST00000266085 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
TIMP3-201ENST00000266085 SELPP16109 830 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 PRKCZQ05513 592 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 OR52K1Q8NGK4 314 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 ELOVL6Q9H5J4 265 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 DMAC2Q9NW81 257 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.7■□□□□ 0.1
TIMP3-201ENST00000266085 C16orf96A6NNT2 1141 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 MT-CO1P00395 513 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 SERPINH1P50454 418 aaKnown RBP15.7■□□□□ 0.1
TIMP3-201ENST00000266085 MAP3K10Q02779 954 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 TMEM139Q8IV31 216 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 ATAD1Q8NBU5 361 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 LRRN4Q8WUT4 740 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 TXNRD2Q9NNW7 524 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 LTBP3Q9NS15 1303 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 ADRA1DP25100 572 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 SMAD3P84022 425 aaKnown RBP15.7■□□□□ 0.1
TIMP3-201ENST00000266085 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 CRHR2Q13324 411 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 SCARA3Q6AZY7 606 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 BNC2Q6ZN30 1099 aaPredicted RBP15.7■□□□□ 0.1
TIMP3-201ENST00000266085 LGMNQ99538 433 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 TAGLN3Q9UI15 199 aa15.7■□□□□ 0.1
TIMP3-201ENST00000266085 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 OR6C75A6NL08 312 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ALOX15P16050 662 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 VCLP18206 1134 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CDK7P50613 346 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 PRKAA2P54646 552 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CRADDP78560 199 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 DUSP4Q13115 394 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 STARD3Q14849 445 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 SCUBE1Q8IWY4 988 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 TTPALQ9BTX7 342 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 OSGEPL1Q9H4B0 414 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 PNMA8BQ9ULN7 279 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 UBDO15205 165 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ERBB2P04626 1255 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 MAPK1P28482 360 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 FLT3P36888 993 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 SLC1A6P48664 564 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 FBXW4P57775 412 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 RCN1Q15293 331 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ARMC12Q5T9G4 340 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 MON1AQ86VX9 555 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 DENND1CQ8IV53 801 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 NMRAL1Q9HBL8 299 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ASAH2Q9NR71 780 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 SCHIP1Q9P0W5 487 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 A8MX80 341 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 C22orf31O95567 290 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ADH1AP07327 375 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 OR4Q2P0C623 313 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 PRIM2P49643 509 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 DMC1Q14565 340 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 NR6A1Q15406 480 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CCL14Q16627 93 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 C11orf96Q7Z7L8 435 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 FBXO39Q8N4B4 442 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 MREGQ8N565 214 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ZYG11BQ9C0D3 744 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 FAM95CA0A1B0GW59 222 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 HNRNPCL2B2RXH8 293 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CYP1A1P04798 512 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 NFKB1P19838 968 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ADSSP30520 456 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 PPM1AP35813 382 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 VHLP40337 213 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ABCG1P45844 678 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 ANKS6Q68DC2 871 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 LRRC49Q8IUZ0 686 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
TIMP3-201ENST00000266085 NETO2Q8NC67 525 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CYGBQ8WWM9 190 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 YIPF2Q9BWQ6 316 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms