RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 BIRC7Q96CA5 298 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 CAMK1GQ96NX5 476 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 FAM129BQ96TA1 746 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 PABPC3Q9H361 631 aaKnown RBP10.04□□□□□ -0.8
VPS41-201ENST00000265745 GAREM1Q9H706 876 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 FAM204AQ9H8W3 233 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 IL21RQ9HBE5 538 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 SCML1Q9UN30 329 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 THADAQ6YHU6 1953 aa10.04□□□□□ -0.8
VPS41-201ENST00000265745 MAP1BP46821 2468 aaKnown RBP10.04□□□□□ -0.8
VPS41-201ENST00000265745 ASCC3Q8N3C0 2202 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 EDDM13A0A1B0GTR0 161 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 A0A1B0GVT2 93 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 CBFA2T3O75081 653 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 ZNF883P0CG24 379 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 PDGFRAP16234 1089 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 CD27P26842 260 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 NOS2P35228 1153 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 AFF3P51826 1226 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 PLK1P53350 603 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 MTA1Q13330 715 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 AUHQ13825 339 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 TRIP6Q15654 476 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 CST6Q15828 149 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 KIF19Q2TAC6 998 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 HSP90AA4PQ58FG1 418 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 CT47A1Q5JQC4 288 aaPredicted RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 TMCO4Q5TGY1 634 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 KLHDC7AQ5VTJ3 777 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 IL27RAQ6UWB1 636 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 DBX2Q6ZNG2 339 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 CLEC17AQ6ZS10 378 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 CIR1Q86X95 450 aaPredicted RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 ZDHHC17Q8IUH5 632 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 MMAAQ8IVH4 418 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 GANCQ8TET4 914 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 SNX19Q92543 992 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 PTPRN2Q92932 1015 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 RNF34Q969K3 372 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 IGSF8Q969P0 613 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 RPL10LQ96L21 214 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 ORAI3Q9BRQ5 295 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 NUP62CLQ9H1M0 184 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 NEUROG2Q9H2A3 272 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 SYNCQ9H7C4 482 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 SAMSN1Q9NSI8 373 aaKnown RBP10.03□□□□□ -0.8
VPS41-201ENST00000265745 FBXL12Q9NXK8 326 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 SERGEFQ9UGK8 458 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 DACH1Q9UI36 760 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 NCKAP1Q9Y2A7 1128 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 MYH10P35580 1976 aa10.03□□□□□ -0.8
VPS41-201ENST00000265745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TCAF2A6NFQ2 919 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 C10orf142B7Z368 130 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 M0QYT0 321 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 MID1O15344 667 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 HYAL3O43820 417 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 PAGE1O75459 146 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 FSBPO95073 299 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TRIM16O95361 564 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 CER1O95813 267 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 UCHL3P15374 230 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 CYP11B1P15538 503 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 SLC8A1P32418 973 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 CDH5P33151 784 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 RDXP35241 583 aaKnown RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 MATKP42679 507 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 GABRB2P47870 512 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 STK19P49842 368 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 GALCP54803 685 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 OXCT1P55809 520 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 SULT2A1Q06520 285 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 SFSWAPQ12872 951 aaKnown RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 NME3Q13232 169 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 ZNF177Q13360 481 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 KCNJ12Q14500 433 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 ZNF423Q2M1K9 1284 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 C5orf22Q49AR2 442 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 RABGAP1LQ5R372 815 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 OTUD1Q5VV17 481 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 KIAA0895LQ68EN5 471 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 CXorf57Q6NSI4 855 aaKnown RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 UNQ6494/PRO21346Q6UXR6 183 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 C14orf80Q86SX3 495 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms